RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 POLKQ9UBT6 870 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 TRAK1Q9UPV9 953 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 TCP11L2Q8N4U5 519 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 PCDHB15Q9Y5E8 787 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 PLEKHG5O94827 1062 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 MTHFSP49914 203 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 CNGB1Q14028 1251 aaPredicted RBP5.31□□□□□ -1.56
UBE4A-201ENST00000252108 CHMP4BQ9H444 224 aaKnown RBP5.31□□□□□ -1.56
UBE4A-201ENST00000252108 KIF24Q5T7B8 1368 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 MAPK8IP3Q9UPT6 1336 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 SCN11AQ9UI33 1791 aa5.31□□□□□ -1.56
UBE4A-201ENST00000252108 FAM161AQ3B820 660 aa5.3□□□□□ -1.56
UBE4A-201ENST00000252108 PLEKHG3A1L390 1219 aa5.3□□□□□ -1.56
UBE4A-201ENST00000252108 C5P01031 1676 aa5.3□□□□□ -1.56
UBE4A-201ENST00000252108 ABCC4O15439 1325 aa5.3□□□□□ -1.56
UBE4A-201ENST00000252108 GSE1Q14687 1217 aa5.3□□□□□ -1.56
UBE4A-201ENST00000252108 RGPD5Q99666 1765 aa5.3□□□□□ -1.56
UBE4A-201ENST00000252108 IBTKQ9P2D0 1353 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-201ENST00000252108 ZNF692Q9BU19 519 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-201ENST00000252108 TNRQ92752 1358 aa5.3□□□□□ -1.56
UBE4A-201ENST00000252108 HDAC1Q13547 482 aaPredicted RBP5.3□□□□□ -1.56
UBE4A-201ENST00000252108 NPHP1O15259 732 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 CABP2Q9NPB3 220 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 RTL1A6NKG5 1358 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 KIF1AQ12756 1690 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 CCDC146Q8IYE0 955 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 GGT6Q6P531 493 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 SMC5Q8IY18 1101 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 SENP3-EIF4A1A0A087X0R7 540 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 TMPOP42166 694 aaKnown RBP5.29□□□□□ -1.56
UBE4A-201ENST00000252108 IL17RAQ96F46 866 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 PRAM1Q96QH2 718 aa5.29□□□□□ -1.56
UBE4A-201ENST00000252108 PXDNLA1KZ92 1463 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 NUP188Q5SRE5 1749 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 SEC24BO95487 1268 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 PMFBP1Q8TBY8 1022 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 ZBTB40Q9NUA8 1239 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 MRC1P22897 1456 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 CICQ96RK0 1608 aaPredicted RBP5.28□□□□□ -1.56
UBE4A-201ENST00000252108 LAMB4A4D0S4 1761 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 LAS1LQ9Y4W2 734 aaKnown RBP5.28□□□□□ -1.56
UBE4A-201ENST00000252108 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.28□□□□□ -1.56
UBE4A-201ENST00000252108 WASLO00401 505 aaPredicted RBP5.28□□□□□ -1.56
UBE4A-201ENST00000252108 CFAP53Q96M91 514 aa5.28□□□□□ -1.56
UBE4A-201ENST00000252108 CLUAP1Q96AJ1 413 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 ZBTB7CA1YPR0 619 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 CDK19Q9BWU1 502 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 KIAA0232Q92628 1395 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 LTKP29376 864 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 SIRT2Q8IXJ6 389 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 KIF2CQ99661 725 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 ISY1Q9ULR0 285 aaKnown RBP5.27□□□□□ -1.57
UBE4A-201ENST00000252108 TJP1Q07157 1748 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 SALL3Q9BXA9 1300 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 ARHGEF10O15013 1369 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 MSH6P52701 1360 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 HEG1Q9ULI3 1381 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 ALDH1L2Q3SY69 923 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 PHACTR3Q96KR7 559 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 WNK3Q9BYP7 1800 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 NHSL1Q5SYE7 1610 aa5.27□□□□□ -1.57
UBE4A-201ENST00000252108 FCHSD2O94868 740 aa5.26□□□□□ -1.57
UBE4A-201ENST00000252108 OVOS2A0A0G2JMS6 1433 aa5.26□□□□□ -1.57
UBE4A-201ENST00000252108 COL22A1Q8NFW1 1626 aaPredicted RBP5.26□□□□□ -1.57
UBE4A-201ENST00000252108 TRIM27P14373 513 aa5.26□□□□□ -1.57
UBE4A-201ENST00000252108 MVPQ14764 893 aaKnown RBP5.26□□□□□ -1.57
UBE4A-201ENST00000252108 ARHGAP45Q92619 1136 aa5.26□□□□□ -1.57
UBE4A-201ENST00000252108 PNNQ9H307 717 aaKnown RBP5.26□□□□□ -1.57
UBE4A-201ENST00000252108 PLEKHG2Q9H7P9 1386 aa5.26□□□□□ -1.57
UBE4A-201ENST00000252108 CEMIPQ8WUJ3 1361 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 VAMP4O75379 141 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 FAM69CQ0P6D2 419 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 ZNF428Q96B54 188 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 MORC1Q86VD1 984 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 FAM43AQ8N2R8 423 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 SSH1Q8WYL5 1049 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 MRPL50Q8N5N7 158 aaKnown RBP5.25□□□□□ -1.57
UBE4A-201ENST00000252108 TRIM44Q96DX7 344 aaPredicted RBP5.25□□□□□ -1.57
UBE4A-201ENST00000252108 TBC1D32Q96NH3 1257 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 RWDD1Q9H446 243 aaPredicted RBP5.25□□□□□ -1.57
UBE4A-201ENST00000252108 CABP1Q9NZU7 370 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 STRCQ7RTU9 1775 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 KIF16BQ96L93 1317 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 ZBTB7BO15156 539 aaPredicted RBP5.25□□□□□ -1.57
UBE4A-201ENST00000252108 WAPLQ7Z5K2 1190 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 PANK1Q8TE04 598 aa5.25□□□□□ -1.57
UBE4A-201ENST00000252108 IGSF1Q8N6C5 1336 aa5.24□□□□□ -1.57
UBE4A-201ENST00000252108 SALL2Q9Y467 1007 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-201ENST00000252108 TOGARAM1Q9Y4F4 1720 aa5.24□□□□□ -1.57
UBE4A-201ENST00000252108 NCKAP5LQ9HCH0 1330 aa5.24□□□□□ -1.57
UBE4A-201ENST00000252108 GGNBP2Q9H3C7 697 aa5.24□□□□□ -1.57
UBE4A-201ENST00000252108 DDX11L8A8MPP1 907 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 ZRANB1Q9UGI0 708 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 RREB1Q92766 1687 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 TBX22Q9Y458 520 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 PLCH1Q4KWH8 1693 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 SETD1BQ9UPS6 1966 aaKnown RBP5.23□□□□□ -1.57
UBE4A-201ENST00000252108 HSP90AA1P07900 732 aaKnown RBP5.23□□□□□ -1.57
UBE4A-201ENST00000252108 RBM25P49756 843 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms