RNA–Protein interactions for RNA: ENST00000250241.12

ILF3-201, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-201ENST00000250241 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
ILF3-201ENST00000250241 SETD1AO15047 1707 aaKnown RBP16.41■□□□□ 0.22
ILF3-201ENST00000250241 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
ILF3-201ENST00000250241 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
ILF3-201ENST00000250241 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
ILF3-201ENST00000250241 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
ILF3-201ENST00000250241 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
ILF3-201ENST00000250241 DLC1Q96QB1 1528 aa16.41■□□□□ 0.22
ILF3-201ENST00000250241 C14orf37Q86TY3 774 aa16.4■□□□□ 0.22
ILF3-201ENST00000250241 SMAP1Q8IYB5 467 aaPredicted RBP16.4■□□□□ 0.22
ILF3-201ENST00000250241 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
ILF3-201ENST00000250241 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
ILF3-201ENST00000250241 NLRP1Q9C000 1473 aa16.4■□□□□ 0.22
ILF3-201ENST00000250241 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
ILF3-201ENST00000250241 MCM4P33991 863 aa16.39■□□□□ 0.21
ILF3-201ENST00000250241 WDR63Q8IWG1 891 aa16.39■□□□□ 0.21
ILF3-201ENST00000250241 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
ILF3-201ENST00000250241 PTPRUQ92729 1446 aa16.39■□□□□ 0.21
ILF3-201ENST00000250241 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
ILF3-201ENST00000250241 TRAK2O60296 914 aa16.38■□□□□ 0.21
ILF3-201ENST00000250241 KCNA6P17658 529 aa16.38■□□□□ 0.21
ILF3-201ENST00000250241 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
ILF3-201ENST00000250241 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
ILF3-201ENST00000250241 FSD2A1L4K1 749 aa16.38■□□□□ 0.21
ILF3-201ENST00000250241 C3P01024 1663 aa16.38■□□□□ 0.21
ILF3-201ENST00000250241 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
ILF3-201ENST00000250241 RARSP54136 660 aaKnown RBP16.37■□□□□ 0.21
ILF3-201ENST00000250241 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
ILF3-201ENST00000250241 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
ILF3-201ENST00000250241 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
ILF3-201ENST00000250241 ATP7BP35670 1465 aa16.37■□□□□ 0.21
ILF3-201ENST00000250241 FER1L4A9Z1Z3 1794 aa16.36■□□□□ 0.21
ILF3-201ENST00000250241 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
ILF3-201ENST00000250241 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
ILF3-201ENST00000250241 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
ILF3-201ENST00000250241 CPS1P31327 1500 aa16.36■□□□□ 0.21
ILF3-201ENST00000250241 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
ILF3-201ENST00000250241 RLBP1P12271 317 aa16.36■□□□□ 0.21
ILF3-201ENST00000250241 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
ILF3-201ENST00000250241 KIAA1211Q6ZU35 1233 aa16.35■□□□□ 0.21
ILF3-201ENST00000250241 TBX22Q9Y458 520 aa16.35■□□□□ 0.21
ILF3-201ENST00000250241 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
ILF3-201ENST00000250241 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
ILF3-201ENST00000250241 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
ILF3-201ENST00000250241 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
ILF3-201ENST00000250241 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
ILF3-201ENST00000250241 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.21
ILF3-201ENST00000250241 FCHSD2O94868 740 aa16.33■□□□□ 0.21
ILF3-201ENST00000250241 MRE11P49959 708 aa16.33■□□□□ 0.21
ILF3-201ENST00000250241 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.21
ILF3-201ENST00000250241 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.21
ILF3-201ENST00000250241 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
ILF3-201ENST00000250241 CCDC27Q2M243 656 aa16.33■□□□□ 0.2
ILF3-201ENST00000250241 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
ILF3-201ENST00000250241 MAP2P11137 1827 aaKnown RBP16.33■□□□□ 0.2
ILF3-201ENST00000250241 KIF20BQ96Q89 1820 aa16.33■□□□□ 0.2
ILF3-201ENST00000250241 TECPR2O15040 1411 aa16.32■□□□□ 0.2
ILF3-201ENST00000250241 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
ILF3-201ENST00000250241 ZHX1Q9UKY1 873 aaPredicted RBP16.32■□□□□ 0.2
ILF3-201ENST00000250241 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
ILF3-201ENST00000250241 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
ILF3-201ENST00000250241 IL13P35225 146 aa16.32■□□□□ 0.2
ILF3-201ENST00000250241 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
ILF3-201ENST00000250241 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.31■□□□□ 0.2
ILF3-201ENST00000250241 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
ILF3-201ENST00000250241 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
ILF3-201ENST00000250241 ANKLE2Q86XL3 938 aa16.31■□□□□ 0.2
ILF3-201ENST00000250241 FTSJ3Q8IY81 847 aaKnown RBP16.31■□□□□ 0.2
ILF3-201ENST00000250241 MED14O60244 1454 aa16.3■□□□□ 0.2
ILF3-201ENST00000250241 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
ILF3-201ENST00000250241 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
ILF3-201ENST00000250241 NLRP6P59044 892 aa16.29■□□□□ 0.2
ILF3-201ENST00000250241 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
ILF3-201ENST00000250241 GAS2L3Q86XJ1 694 aa16.29■□□□□ 0.2
ILF3-201ENST00000250241 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
ILF3-201ENST00000250241 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
ILF3-201ENST00000250241 CDC42BPGQ6DT37 1551 aa16.28■□□□□ 0.2
ILF3-201ENST00000250241 ANKRD26Q9UPS8 1709 aa16.27■□□□□ 0.2
ILF3-201ENST00000250241 PLEKHG3A1L390 1219 aa16.27■□□□□ 0.2
ILF3-201ENST00000250241 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
ILF3-201ENST00000250241 NFE2L2Q16236 605 aa16.27■□□□□ 0.2
ILF3-201ENST00000250241 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.2
ILF3-201ENST00000250241 AMPHP49418 695 aa16.27■□□□□ 0.2
ILF3-201ENST00000250241 UTP14CQ5TAP6 766 aaKnown RBP16.27■□□□□ 0.2
ILF3-201ENST00000250241 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
ILF3-201ENST00000250241 FAM13BQ9NYF5 915 aa16.27■□□□□ 0.2
ILF3-201ENST00000250241 TERF1P54274 439 aa16.27■□□□□ 0.19
ILF3-201ENST00000250241 PDE3AQ14432 1141 aa16.27■□□□□ 0.19
ILF3-201ENST00000250241 LMOD2Q6P5Q4 547 aa16.26■□□□□ 0.19
ILF3-201ENST00000250241 MTERF4Q7Z6M4 381 aaKnown RBP16.26■□□□□ 0.19
ILF3-201ENST00000250241 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
ILF3-201ENST00000250241 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
ILF3-201ENST00000250241 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
ILF3-201ENST00000250241 ZKSCAN2Q63HK3 967 aa16.25■□□□□ 0.19
ILF3-201ENST00000250241 ITPRIPQ8IWB1 547 aa16.25■□□□□ 0.19
ILF3-201ENST00000250241 NOB1Q9ULX3 412 aaKnown RBP16.25■□□□□ 0.19
ILF3-201ENST00000250241 ABTB2Q8N961 1025 aa16.25■□□□□ 0.19
ILF3-201ENST00000250241 USP6P35125 1406 aa16.24■□□□□ 0.19
ILF3-201ENST00000250241 KNDC1Q76NI1 1749 aa16.24■□□□□ 0.19
ILF3-201ENST00000250241 HSCBQ8IWL3 235 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms