RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
CCDC117-201ENST00000249064 ZSCAN23Q3MJ62 389 aa16.16■□□□□ 0.18
CCDC117-201ENST00000249064 TTC12Q9H892 705 aaPredicted RBP16.16■□□□□ 0.18
CCDC117-201ENST00000249064 CD109Q6YHK3 1445 aa16.15■□□□□ 0.18
CCDC117-201ENST00000249064 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
CCDC117-201ENST00000249064 TSPY26PQ9H489 355 aa16.15■□□□□ 0.18
CCDC117-201ENST00000249064 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
CCDC117-201ENST00000249064 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
CCDC117-201ENST00000249064 CCDC27Q2M243 656 aa16.15■□□□□ 0.18
CCDC117-201ENST00000249064 TRMT2AQ8IZ69 625 aaKnown RBP16.15■□□□□ 0.18
CCDC117-201ENST00000249064 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
CCDC117-201ENST00000249064 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.17
CCDC117-201ENST00000249064 PHF14O94880 888 aa16.14■□□□□ 0.17
CCDC117-201ENST00000249064 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
CCDC117-201ENST00000249064 ANTXR1Q9H6X2 564 aa16.14■□□□□ 0.17
CCDC117-201ENST00000249064 DIAPH3Q9NSV4 1193 aa16.14■□□□□ 0.17
CCDC117-201ENST00000249064 MYO5CQ9NQX4 1742 aa16.14■□□□□ 0.17
CCDC117-201ENST00000249064 NEK4P51957 841 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 CHAMP1Q96JM3 812 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 RBSNQ9H1K0 784 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 CHD1LQ86WJ1 897 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 CCDC94Q9BW85 323 aaPredicted RBP16.13■□□□□ 0.17
CCDC117-201ENST00000249064 ZKSCAN5Q9Y2L8 839 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 RILPL2Q969X0 211 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 CHD1O14646 1710 aa16.13■□□□□ 0.17
CCDC117-201ENST00000249064 TSPYL6Q8N831 410 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 ZNF428Q96B54 188 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 ASXL2Q76L83 1435 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 FBXW7Q969H0 707 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 PHACTR3Q96KR7 559 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 CIZ1Q9ULV3 898 aaPredicted RBP16.12■□□□□ 0.17
CCDC117-201ENST00000249064 PREX2Q70Z35 1606 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 ZRSR1Q15695 479 aaKnown RBP16.12■□□□□ 0.17
CCDC117-201ENST00000249064 GAS2L2Q8NHY3 880 aa16.12■□□□□ 0.17
CCDC117-201ENST00000249064 MCCP23508 829 aa16.11■□□□□ 0.17
CCDC117-201ENST00000249064 GNAI1P63096 354 aa16.11■□□□□ 0.17
CCDC117-201ENST00000249064 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
CCDC117-201ENST00000249064 ERVK-7P63135 1459 aa16.11■□□□□ 0.17
CCDC117-201ENST00000249064 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
CCDC117-201ENST00000249064 PTPRTO14522 1441 aa16.1■□□□□ 0.17
CCDC117-201ENST00000249064 FIBPO43427 364 aa16.1■□□□□ 0.17
CCDC117-201ENST00000249064 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
CCDC117-201ENST00000249064 MCM10Q7L590 875 aa16.1■□□□□ 0.17
CCDC117-201ENST00000249064 SMARCA5O60264 1052 aaPredicted RBP16.09■□□□□ 0.17
CCDC117-201ENST00000249064 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
CCDC117-201ENST00000249064 AMPHP49418 695 aa16.09■□□□□ 0.17
CCDC117-201ENST00000249064 SLC52A1Q9NWF4 448 aa16.09■□□□□ 0.17
CCDC117-201ENST00000249064 USP19O94966 1318 aa16.09■□□□□ 0.17
CCDC117-201ENST00000249064 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
CCDC117-201ENST00000249064 ZBTB9Q96C00 473 aa16.09■□□□□ 0.17
CCDC117-201ENST00000249064 TRIM35Q9UPQ4 493 aa16.09■□□□□ 0.17
CCDC117-201ENST00000249064 NINLQ9Y2I6 1382 aa16.08■□□□□ 0.17
CCDC117-201ENST00000249064 ANO2Q9NQ90 1003 aa16.08■□□□□ 0.17
CCDC117-201ENST00000249064 A0A1W2PP64 1363 aa16.08■□□□□ 0.17
CCDC117-201ENST00000249064 PDIA4P13667 645 aaKnown RBP16.08■□□□□ 0.16
CCDC117-201ENST00000249064 U2AF2P26368 475 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC117-201ENST00000249064 FCHSD2O94868 740 aa16.07■□□□□ 0.16
CCDC117-201ENST00000249064 SKIDA1Q1XH10 827 aa16.07■□□□□ 0.16
CCDC117-201ENST00000249064 ZFP91Q96JP5 570 aaPredicted RBP16.07■□□□□ 0.16
CCDC117-201ENST00000249064 CDC45O75419 566 aa16.07■□□□□ 0.16
CCDC117-201ENST00000249064 CCAR2Q8N163 923 aaKnown RBP16.07■□□□□ 0.16
CCDC117-201ENST00000249064 CCDC66A2RUB6 948 aa16.06■□□□□ 0.16
CCDC117-201ENST00000249064 NFE2L2Q16236 605 aa16.06■□□□□ 0.16
CCDC117-201ENST00000249064 LMOD3Q0VAK6 560 aa16.06■□□□□ 0.16
CCDC117-201ENST00000249064 TPD52L1Q16890 204 aaPredicted RBP16.06■□□□□ 0.16
CCDC117-201ENST00000249064 API5Q9BZZ5 524 aaKnown RBP16.06■□□□□ 0.16
CCDC117-201ENST00000249064 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
CCDC117-201ENST00000249064 C16orf45Q96MC5 204 aaPredicted RBP16.06■□□□□ 0.16
CCDC117-201ENST00000249064 NPC1L1Q9UHC9 1359 aa16.06■□□□□ 0.16
CCDC117-201ENST00000249064 SLC26A8Q96RN1 970 aa16.05■□□□□ 0.16
CCDC117-201ENST00000249064 NOL7Q9UMY1 257 aaKnown RBP16.05■□□□□ 0.16
CCDC117-201ENST00000249064 ANKRD36BQ8N2N9 1353 aa16.05■□□□□ 0.16
CCDC117-201ENST00000249064 ZBTB22O15209 634 aa16.05■□□□□ 0.16
CCDC117-201ENST00000249064 RAB3GAP1Q15042 981 aa16.05■□□□□ 0.16
CCDC117-201ENST00000249064 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC117-201ENST00000249064 V9GYY5 206 aaPredicted RBP16.05■□□□□ 0.16
CCDC117-201ENST00000249064 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
CCDC117-201ENST00000249064 ATAD2Q6PL18 1390 aa16.05■□□□□ 0.16
CCDC117-201ENST00000249064 NOLC1Q14978 699 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC117-201ENST00000249064 GORABQ5T7V8 394 aa16.05■□□□□ 0.16
CCDC117-201ENST00000249064 C16orf71Q8IYS4 520 aaPredicted RBP16.04■□□□□ 0.16
CCDC117-201ENST00000249064 STK31Q9BXU1 1019 aa16.04■□□□□ 0.16
CCDC117-201ENST00000249064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC117-201ENST00000249064 VPS37CA5D8V6 355 aaPredicted RBP16.04■□□□□ 0.16
CCDC117-201ENST00000249064 MBD3O95983 291 aa16.04■□□□□ 0.16
CCDC117-201ENST00000249064 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
CCDC117-201ENST00000249064 MBIPQ9NS73 344 aa16.04■□□□□ 0.16
CCDC117-201ENST00000249064 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
CCDC117-201ENST00000249064 INSRP06213 1382 aa16.04■□□□□ 0.16
CCDC117-201ENST00000249064 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
CCDC117-201ENST00000249064 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
CCDC117-201ENST00000249064 RTEL1-TNFRSF6BF6WH68 1400 aa16.03■□□□□ 0.16
CCDC117-201ENST00000249064 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
CCDC117-201ENST00000249064 NUDT16Q96DE0 195 aaKnown RBP16.03■□□□□ 0.16
CCDC117-201ENST00000249064 F6X3S4 739 aa16.03■□□□□ 0.16
CCDC117-201ENST00000249064 RABEP1Q15276 862 aa16.03■□□□□ 0.16
CCDC117-201ENST00000249064 TRIM5Q9C035 493 aa16.03■□□□□ 0.16
CCDC117-201ENST00000249064 TSPYL4Q9UJ04 414 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms