RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF692Q9BU19 519 aaPredicted RBP24.87■■□□□ 1.57
CDC42EP1-201ENST00000249014 HDAC1Q13547 482 aaPredicted RBP24.86■■□□□ 1.57
CDC42EP1-201ENST00000249014 USP35Q9P2H5 1018 aa24.86■■□□□ 1.57
CDC42EP1-201ENST00000249014 NRKQ7Z2Y5 1582 aa24.86■■□□□ 1.57
CDC42EP1-201ENST00000249014 IPO8O15397 1037 aaKnown RBP24.86■■□□□ 1.57
CDC42EP1-201ENST00000249014 TOPAZ1Q8N9V7 1692 aa24.85■■□□□ 1.57
CDC42EP1-201ENST00000249014 ZBTB40Q9NUA8 1239 aa24.84■■□□□ 1.57
CDC42EP1-201ENST00000249014 PLEKHG1Q9ULL1 1385 aa24.84■■□□□ 1.57
CDC42EP1-201ENST00000249014 VAMP4O75379 141 aa24.83■■□□□ 1.57
CDC42EP1-201ENST00000249014 ZNF853P0CG23 659 aa24.83■■□□□ 1.56
CDC42EP1-201ENST00000249014 BRPF1P55201 1214 aaPredicted RBP24.83■■□□□ 1.56
CDC42EP1-201ENST00000249014 TSPYL6Q8N831 410 aa24.83■■□□□ 1.56
CDC42EP1-201ENST00000249014 ZNF428Q96B54 188 aa24.82■■□□□ 1.56
CDC42EP1-201ENST00000249014 IFT57Q9NWB7 429 aa24.82■■□□□ 1.56
CDC42EP1-201ENST00000249014 CEBPAP49715 358 aaPredicted RBP24.81■■□□□ 1.56
CDC42EP1-201ENST00000249014 CALD1Q05682 793 aaKnown RBP24.81■■□□□ 1.56
CDC42EP1-201ENST00000249014 MBIPQ9NS73 344 aa24.81■■□□□ 1.56
CDC42EP1-201ENST00000249014 NUTM2FA1L443 756 aa24.8■■□□□ 1.56
CDC42EP1-201ENST00000249014 GNAI1P63096 354 aa24.8■■□□□ 1.56
CDC42EP1-201ENST00000249014 PTPRUQ92729 1446 aa24.8■■□□□ 1.56
CDC42EP1-201ENST00000249014 ACEP12821 1306 aa24.8■■□□□ 1.56
CDC42EP1-201ENST00000249014 TTC21BQ7Z4L5 1316 aa24.8■■□□□ 1.56
CDC42EP1-201ENST00000249014 SMC5Q8IY18 1101 aa24.78■■□□□ 1.56
CDC42EP1-201ENST00000249014 MRPL50Q8N5N7 158 aaKnown RBP24.78■■□□□ 1.56
CDC42EP1-201ENST00000249014 BCL11AQ9H165 835 aa24.78■■□□□ 1.56
CDC42EP1-201ENST00000249014 FAM83GA6ND36 823 aa24.78■■□□□ 1.56
CDC42EP1-201ENST00000249014 SLC26A8Q96RN1 970 aa24.78■■□□□ 1.56
CDC42EP1-201ENST00000249014 ELL2O00472 640 aaPredicted RBP24.77■■□□□ 1.56
CDC42EP1-201ENST00000249014 NFKBIBQ15653 356 aa24.77■■□□□ 1.56
CDC42EP1-201ENST00000249014 OVOS2A0A0J9YW53 1432 aa24.77■■□□□ 1.56
CDC42EP1-201ENST00000249014 OVOS2Q6IE36 1432 aa24.77■■□□□ 1.56
CDC42EP1-201ENST00000249014 PLEKHG3A1L390 1219 aa24.76■■□□□ 1.55
CDC42EP1-201ENST00000249014 NALCNQ8IZF0 1738 aa24.76■■□□□ 1.55
CDC42EP1-201ENST00000249014 USP6P35125 1406 aa24.76■■□□□ 1.55
CDC42EP1-201ENST00000249014 CFAP44Q96MT7 982 aa24.76■■□□□ 1.55
CDC42EP1-201ENST00000249014 LMOD3Q0VAK6 560 aa24.75■■□□□ 1.55
CDC42EP1-201ENST00000249014 EIF4A2Q14240 407 aaKnown RBP24.75■■□□□ 1.55
CDC42EP1-201ENST00000249014 AEBP1Q8IUX7 1158 aa24.75■■□□□ 1.55
CDC42EP1-201ENST00000249014 PTCH1Q13635 1447 aa24.75■■□□□ 1.55
CDC42EP1-201ENST00000249014 PEAK1Q9H792 1746 aa24.74■■□□□ 1.55
CDC42EP1-201ENST00000249014 DCTN1Q14203 1278 aa24.74■■□□□ 1.55
CDC42EP1-201ENST00000249014 C8orf58Q8NAV2 365 aa24.73■■□□□ 1.55
CDC42EP1-201ENST00000249014 TBC1D32Q96NH3 1257 aa24.73■■□□□ 1.55
CDC42EP1-201ENST00000249014 TWISTNBQ3B726 338 aaPredicted RBP24.73■■□□□ 1.55
CDC42EP1-201ENST00000249014 ARHGAP45Q92619 1136 aa24.73■■□□□ 1.55
CDC42EP1-201ENST00000249014 PIK3R4Q99570 1358 aa24.72■■□□□ 1.55
CDC42EP1-201ENST00000249014 ZBTB7BO15156 539 aaPredicted RBP24.71■■□□□ 1.55
CDC42EP1-201ENST00000249014 SULT6B1Q6IMI4 303 aa24.71■■□□□ 1.55
CDC42EP1-201ENST00000249014 UPF2Q9HAU5 1272 aaKnown RBP24.71■■□□□ 1.55
CDC42EP1-201ENST00000249014 SLIT1O75093 1534 aa24.71■■□□□ 1.55
CDC42EP1-201ENST00000249014 EID1Q9Y6B2 187 aa24.7■■□□□ 1.55
CDC42EP1-201ENST00000249014 SSH2Q76I76 1423 aa24.69■■□□□ 1.54
CDC42EP1-201ENST00000249014 RGPD1P0DJD0 1748 aa24.69■■□□□ 1.54
CDC42EP1-201ENST00000249014 ARHGAP23Q9P227 1491 aa24.69■■□□□ 1.54
CDC42EP1-201ENST00000249014 AMOTL2Q9Y2J4 779 aa24.69■■□□□ 1.54
CDC42EP1-201ENST00000249014 HSP90AB2PQ58FF8 381 aa24.69■■□□□ 1.54
CDC42EP1-201ENST00000249014 RGPD8O14715 1765 aaPredicted RBP24.68■■□□□ 1.54
CDC42EP1-201ENST00000249014 NUCB1Q02818 461 aa24.68■■□□□ 1.54
CDC42EP1-201ENST00000249014 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
CDC42EP1-201ENST00000249014 ABCC4O15439 1325 aa24.68■■□□□ 1.54
CDC42EP1-201ENST00000249014 USP31Q70CQ4 1352 aa24.68■■□□□ 1.54
CDC42EP1-201ENST00000249014 C1orf115Q9H7X2 142 aa24.66■■□□□ 1.54
CDC42EP1-201ENST00000249014 BECN1Q14457 450 aa24.65■■□□□ 1.54
CDC42EP1-201ENST00000249014 FER1L4A9Z1Z3 1794 aa24.65■■□□□ 1.54
CDC42EP1-201ENST00000249014 SOX12O15370 315 aa24.64■■□□□ 1.54
CDC42EP1-201ENST00000249014 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
CDC42EP1-201ENST00000249014 TBX22Q9Y458 520 aa24.64■■□□□ 1.54
CDC42EP1-201ENST00000249014 LNPKQ9C0E8 428 aa24.64■■□□□ 1.53
CDC42EP1-201ENST00000249014 FMN2Q9NZ56 1722 aa24.63■■□□□ 1.53
CDC42EP1-201ENST00000249014 CHD1LQ86WJ1 897 aa24.63■■□□□ 1.53
CDC42EP1-201ENST00000249014 DIP2AQ14689 1571 aa24.62■■□□□ 1.53
CDC42EP1-201ENST00000249014 FRAT2O75474 233 aaPredicted RBP24.61■■□□□ 1.53
CDC42EP1-201ENST00000249014 MCM10Q7L590 875 aa24.61■■□□□ 1.53
CDC42EP1-201ENST00000249014 CHMP4BQ9H444 224 aaKnown RBP24.61■■□□□ 1.53
CDC42EP1-201ENST00000249014 KRT24Q2M2I5 525 aa24.61■■□□□ 1.53
CDC42EP1-201ENST00000249014 SIRT2Q8IXJ6 389 aa24.61■■□□□ 1.53
CDC42EP1-201ENST00000249014 MAP3K19Q56UN5 1328 aa24.6■■□□□ 1.53
CDC42EP1-201ENST00000249014 TTC21AQ8NDW8 1320 aa24.6■■□□□ 1.53
CDC42EP1-201ENST00000249014 MFAP1P55081 439 aaKnown RBP24.6■■□□□ 1.53
CDC42EP1-201ENST00000249014 TBC1D2Q9BYX2 928 aa24.59■■□□□ 1.53
CDC42EP1-201ENST00000249014 API5Q9BZZ5 524 aaKnown RBP24.59■■□□□ 1.53
CDC42EP1-201ENST00000249014 CHL1O00533 1208 aa24.59■■□□□ 1.53
CDC42EP1-201ENST00000249014 RIMS1Q86UR5 1692 aaKnown RBP24.58■■□□□ 1.53
CDC42EP1-201ENST00000249014 C22orf23Q9BZE7 217 aa24.58■■□□□ 1.53
CDC42EP1-201ENST00000249014 GCC1Q96CN9 775 aa24.57■■□□□ 1.52
CDC42EP1-201ENST00000249014 XRN1Q8IZH2 1706 aaKnown RBP24.57■■□□□ 1.52
CDC42EP1-201ENST00000249014 PIK3C2AO00443 1686 aa24.57■■□□□ 1.52
CDC42EP1-201ENST00000249014 ANKRD45Q5TZF3 282 aa24.56■■□□□ 1.52
CDC42EP1-201ENST00000249014 THEMISQ8N1K5 641 aaPredicted RBP24.56■■□□□ 1.52
CDC42EP1-201ENST00000249014 SLKQ9H2G2 1235 aaPredicted RBP24.56■■□□□ 1.52
CDC42EP1-201ENST00000249014 NGDNQ8NEJ9 315 aaKnown RBP24.56■■□□□ 1.52
CDC42EP1-201ENST00000249014 ARHGEF10O15013 1369 aa24.55■■□□□ 1.52
CDC42EP1-201ENST00000249014 ANTXR1Q9H6X2 564 aa24.54■■□□□ 1.52
CDC42EP1-201ENST00000249014 CRB1P82279 1406 aa24.54■■□□□ 1.52
CDC42EP1-201ENST00000249014 SBNO1A3KN83 1393 aa24.54■■□□□ 1.52
CDC42EP1-201ENST00000249014 FLT4P35916 1363 aa24.54■■□□□ 1.52
CDC42EP1-201ENST00000249014 RGS12O14924 1447 aa24.54■■□□□ 1.52
CDC42EP1-201ENST00000249014 GSE1Q14687 1217 aa24.53■■□□□ 1.52
CDC42EP1-201ENST00000249014 KIAA0232Q92628 1395 aa24.53■■□□□ 1.52
CDC42EP1-201ENST00000249014 FOXO3O43524 673 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms