RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 XBP1P17861 261 aa12.08□□□□□ -0.48
VIL1-201ENST00000248444 PSMA5P28066 241 aa12.08□□□□□ -0.48
VIL1-201ENST00000248444 TPM1P09493 284 aa12.08□□□□□ -0.48
VIL1-201ENST00000248444 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
VIL1-201ENST00000248444 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
VIL1-201ENST00000248444 HOOK1Q9UJC3 728 aaKnown RBP12.08□□□□□ -0.48
VIL1-201ENST00000248444 ADGRF5Q8IZF2 1346 aa12.08□□□□□ -0.48
VIL1-201ENST00000248444 FCHSD2O94868 740 aa12.07□□□□□ -0.48
VIL1-201ENST00000248444 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
VIL1-201ENST00000248444 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
VIL1-201ENST00000248444 MAP4K4O95819 1239 aaPredicted RBP12.07□□□□□ -0.48
VIL1-201ENST00000248444 MCM10Q7L590 875 aa12.07□□□□□ -0.48
VIL1-201ENST00000248444 TNRQ92752 1358 aa12.07□□□□□ -0.48
VIL1-201ENST00000248444 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
VIL1-201ENST00000248444 AAMPQ13685 434 aa12.07□□□□□ -0.48
VIL1-201ENST00000248444 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
VIL1-201ENST00000248444 FKBP4Q02790 459 aaKnown RBP eCLIP12.06□□□□□ -0.48
VIL1-201ENST00000248444 ZNF652Q9Y2D9 606 aa12.06□□□□□ -0.48
VIL1-201ENST00000248444 HIP1O00291 1037 aa12.06□□□□□ -0.48
VIL1-201ENST00000248444 EXOC5O00471 708 aa12.06□□□□□ -0.48
VIL1-201ENST00000248444 BCAR3O75815 825 aa12.06□□□□□ -0.48
VIL1-201ENST00000248444 ASXL2Q76L83 1435 aa12.06□□□□□ -0.48
VIL1-201ENST00000248444 NAIPQ13075 1403 aa12.05□□□□□ -0.48
VIL1-201ENST00000248444 NFE2L2Q16236 605 aa12.05□□□□□ -0.48
VIL1-201ENST00000248444 TEX14Q8IWB6 1497 aa12.05□□□□□ -0.48
VIL1-201ENST00000248444 ANKRD20A12PQ8NF67 263 aa12.05□□□□□ -0.48
VIL1-201ENST00000248444 WDR63Q8IWG1 891 aa12.05□□□□□ -0.48
VIL1-201ENST00000248444 NOS1P29475 1434 aa12.05□□□□□ -0.48
VIL1-201ENST00000248444 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 C22orf23Q9BZE7 217 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 LRRCC1Q9C099 1032 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 RAI14Q9P0K7 980 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 MSH6P52701 1360 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 DCTN1Q14203 1278 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
VIL1-201ENST00000248444 NACAP1Q9BZK3 213 aa12.04□□□□□ -0.48
VIL1-201ENST00000248444 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 AACSQ86V21 672 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 R3HCC1Q9Y3T6 440 aaKnown RBP12.03□□□□□ -0.48
VIL1-201ENST00000248444 TOM1O60784 492 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
VIL1-201ENST00000248444 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 ATP2B1P20020 1258 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 DHX29Q7Z478 1369 aaKnown RBP12.03□□□□□ -0.48
VIL1-201ENST00000248444 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
VIL1-201ENST00000248444 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 CEP126Q9P2H0 1117 aa12.03□□□□□ -0.48
VIL1-201ENST00000248444 CHRNA2Q15822 529 aa12.02□□□□□ -0.49
VIL1-201ENST00000248444 GCC1Q96CN9 775 aa12.02□□□□□ -0.49
VIL1-201ENST00000248444 UNC13AQ9UPW8 1703 aa12.02□□□□□ -0.49
VIL1-201ENST00000248444 TMPOP42166 694 aaKnown RBP12.02□□□□□ -0.49
VIL1-201ENST00000248444 SKOR2Q2VWA4 1001 aaPredicted RBP12.02□□□□□ -0.49
VIL1-201ENST00000248444 ZSCAN25Q6NSZ9 544 aa12.02□□□□□ -0.49
VIL1-201ENST00000248444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.02□□□□□ -0.49
VIL1-201ENST00000248444 ARID3AQ99856 593 aa12.02□□□□□ -0.49
VIL1-201ENST00000248444 DUSP27Q5VZP5 1158 aa12.01□□□□□ -0.49
VIL1-201ENST00000248444 MYD88Q99836 296 aa12.01□□□□□ -0.49
VIL1-201ENST00000248444 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
VIL1-201ENST00000248444 LRP2BPQ9P2M1 347 aa12.01□□□□□ -0.49
VIL1-201ENST00000248444 CCDC73Q6ZRK6 1079 aa12.01□□□□□ -0.49
VIL1-201ENST00000248444 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
VIL1-201ENST00000248444 ZSCAN21Q9Y5A6 473 aaPredicted RBP12□□□□□ -0.49
VIL1-201ENST00000248444 METTL24Q5JXM2 366 aa12□□□□□ -0.49
VIL1-201ENST00000248444 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
VIL1-201ENST00000248444 ATF7IPQ6VMQ6 1270 aa12□□□□□ -0.49
VIL1-201ENST00000248444 AK7Q96M32 723 aa12□□□□□ -0.49
VIL1-201ENST00000248444 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
VIL1-201ENST00000248444 CCDC69A6NI79 296 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 CCAR2Q8N163 923 aaKnown RBP11.99□□□□□ -0.49
VIL1-201ENST00000248444 CDK5RAP3Q96JB5 506 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 TMOD2Q9NZR1 351 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 TDO2P48775 406 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 NUP133Q8WUM0 1156 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
VIL1-201ENST00000248444 KDM5BQ9UGL1 1544 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 C8orf37Q96NL8 207 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
VIL1-201ENST00000248444 IPO7O95373 1038 aaKnown RBP11.99□□□□□ -0.49
VIL1-201ENST00000248444 CT47B1P0C2W7 299 aaPredicted RBP11.99□□□□□ -0.49
VIL1-201ENST00000248444 HSPA2P54652 639 aa11.99□□□□□ -0.49
VIL1-201ENST00000248444 EPS15P42566 896 aa11.98□□□□□ -0.49
VIL1-201ENST00000248444 ACEP12821 1306 aa11.98□□□□□ -0.49
VIL1-201ENST00000248444 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
VIL1-201ENST00000248444 WWC2Q6AWC2 1192 aa11.98□□□□□ -0.49
VIL1-201ENST00000248444 IL1RAPL2Q9NP60 686 aa11.98□□□□□ -0.49
VIL1-201ENST00000248444 PDE3AQ14432 1141 aa11.98□□□□□ -0.49
VIL1-201ENST00000248444 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
VIL1-201ENST00000248444 TRMT112Q9UI30 125 aaKnown RBP11.98□□□□□ -0.49
VIL1-201ENST00000248444 MPHOSPH10O00566 681 aaKnown RBP11.98□□□□□ -0.49
VIL1-201ENST00000248444 RAPGEF6Q8TEU7 1601 aa11.98□□□□□ -0.49
VIL1-201ENST00000248444 STK3Q13188 491 aa11.97□□□□□ -0.49
VIL1-201ENST00000248444 NUCB2P80303 420 aa11.97□□□□□ -0.49
VIL1-201ENST00000248444 GOLGA6L1Q8N7Z2 621 aa11.97□□□□□ -0.49
VIL1-201ENST00000248444 CHMP5Q9NZZ3 219 aa11.97□□□□□ -0.49
VIL1-201ENST00000248444 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
VIL1-201ENST00000248444 NEK4P51957 841 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms