RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 CHD1LQ86WJ1 897 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 AEBP1Q8IUX7 1158 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 EXOC6BQ9Y2D4 811 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 GPS2Q13227 327 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
FAM78A-201ENST00000247295 NFE2L2Q16236 605 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 CGNQ9P2M7 1197 aaKnown RBP13.62□□□□□ -0.23
FAM78A-201ENST00000247295 FIBPO43427 364 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 ATP2B1P20020 1258 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 SPC24Q8NBT2 197 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 RARSP54136 660 aaKnown RBP13.61□□□□□ -0.23
FAM78A-201ENST00000247295 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
FAM78A-201ENST00000247295 PANK2Q9BZ23 570 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 PTPRKQ15262 1439 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 TPM3P06753 285 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 CHMP4CQ96CF2 233 aa13.6□□□□□ -0.23
FAM78A-201ENST00000247295 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
FAM78A-201ENST00000247295 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
FAM78A-201ENST00000247295 CEBPZQ03701 1054 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 PATL2C9JE40 543 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 RABEP1Q15276 862 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 SKIDA1Q1XH10 827 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 CCDC73Q6ZRK6 1079 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 STK3Q13188 491 aa13.58□□□□□ -0.23
FAM78A-201ENST00000247295 SDF4Q9BRK5 362 aa13.58□□□□□ -0.23
FAM78A-201ENST00000247295 RPRD2Q5VT52 1461 aaKnown RBP13.58□□□□□ -0.24
FAM78A-201ENST00000247295 CT47B1P0C2W7 299 aaPredicted RBP13.58□□□□□ -0.24
FAM78A-201ENST00000247295 CD109Q6YHK3 1445 aa13.58□□□□□ -0.24
FAM78A-201ENST00000247295 F6X3S4 739 aa13.58□□□□□ -0.24
FAM78A-201ENST00000247295 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
FAM78A-201ENST00000247295 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.24
FAM78A-201ENST00000247295 ERICH2A1L162 156 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 DISP3Q9P2K9 1392 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 MNS1Q8NEH6 495 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
FAM78A-201ENST00000247295 CABP4P57796 275 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 PDCL2Q8N4E4 241 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 FMNL2Q96PY5 1086 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
FAM78A-201ENST00000247295 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
FAM78A-201ENST00000247295 CLCN1P35523 988 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 AMOTL1Q8IY63 956 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 BTBD11A6QL63 1104 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 FOXO3O43524 673 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 TSPY26PQ9H489 355 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 PSMA5P28066 241 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 CWC27Q6UX04 472 aaKnown RBP13.55□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
FAM78A-201ENST00000247295 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
FAM78A-201ENST00000247295 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 AACSQ86V21 672 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 NOM1Q5C9Z4 860 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 PCMTD1Q96MG8 357 aaPredicted RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 CNNM1Q9NRU3 951 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 TRIM27P14373 513 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
FAM78A-201ENST00000247295 NOS1P29475 1434 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.24
FAM78A-201ENST00000247295 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 RPAP2Q8IXW5 612 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 TPM1P09493 284 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 MBD3O95983 291 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 CUL7Q14999 1698 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms