RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
NUP85-201ENST00000245544 C1orf167Q5SNV9 1468 aa17.49■□□□□ 0.39
NUP85-201ENST00000245544 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
NUP85-201ENST00000245544 SBNO1A3KN83 1393 aa17.49■□□□□ 0.39
NUP85-201ENST00000245544 SULT6B1Q6IMI4 303 aa17.49■□□□□ 0.39
NUP85-201ENST00000245544 NFE2L2Q16236 605 aa17.48■□□□□ 0.39
NUP85-201ENST00000245544 FLT4P35916 1363 aa17.48■□□□□ 0.39
NUP85-201ENST00000245544 AMPHP49418 695 aa17.48■□□□□ 0.39
NUP85-201ENST00000245544 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
NUP85-201ENST00000245544 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
NUP85-201ENST00000245544 NEFMP07197 916 aa17.47■□□□□ 0.39
NUP85-201ENST00000245544 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
NUP85-201ENST00000245544 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
NUP85-201ENST00000245544 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
NUP85-201ENST00000245544 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
NUP85-201ENST00000245544 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
NUP85-201ENST00000245544 MST1RQ04912 1400 aa17.45■□□□□ 0.38
NUP85-201ENST00000245544 DLG5Q8TDM6 1919 aa17.45■□□□□ 0.38
NUP85-201ENST00000245544 ATF3P18847 181 aa17.45■□□□□ 0.38
NUP85-201ENST00000245544 HOXC9P31274 260 aa17.45■□□□□ 0.38
NUP85-201ENST00000245544 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
NUP85-201ENST00000245544 DDX17Q92841 729 aaKnown RBP17.44■□□□□ 0.38
NUP85-201ENST00000245544 RARSP54136 660 aaKnown RBP17.44■□□□□ 0.38
NUP85-201ENST00000245544 XIRP1Q702N8 1843 aaKnown RBP17.43■□□□□ 0.38
NUP85-201ENST00000245544 IL16Q14005 1332 aa17.43■□□□□ 0.38
NUP85-201ENST00000245544 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
NUP85-201ENST00000245544 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
NUP85-201ENST00000245544 EYA1Q99502 592 aa17.43■□□□□ 0.38
NUP85-201ENST00000245544 EXOSC9Q06265 439 aaKnown RBP17.42■□□□□ 0.38
NUP85-201ENST00000245544 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
NUP85-201ENST00000245544 NFAT5O94916 1531 aa17.42■□□□□ 0.38
NUP85-201ENST00000245544 LTN1O94822 1766 aa17.42■□□□□ 0.38
NUP85-201ENST00000245544 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
NUP85-201ENST00000245544 ZNF335Q9H4Z2 1342 aaPredicted RBP17.42■□□□□ 0.38
NUP85-201ENST00000245544 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
NUP85-201ENST00000245544 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
NUP85-201ENST00000245544 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
NUP85-201ENST00000245544 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
NUP85-201ENST00000245544 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
NUP85-201ENST00000245544 LAS1LQ9Y4W2 734 aaKnown RBP17.41■□□□□ 0.38
NUP85-201ENST00000245544 KIF1AQ12756 1690 aa17.41■□□□□ 0.38
NUP85-201ENST00000245544 DCCP43146 1447 aa17.4■□□□□ 0.38
NUP85-201ENST00000245544 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
NUP85-201ENST00000245544 IGSF1Q8N6C5 1336 aa17.39■□□□□ 0.37
NUP85-201ENST00000245544 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
NUP85-201ENST00000245544 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
NUP85-201ENST00000245544 KIF24Q5T7B8 1368 aa17.39■□□□□ 0.37
NUP85-201ENST00000245544 CADPS2Q86UW7 1296 aa17.38■□□□□ 0.37
NUP85-201ENST00000245544 KDRP35968 1356 aa17.38■□□□□ 0.37
NUP85-201ENST00000245544 GCP02774 474 aa17.38■□□□□ 0.37
NUP85-201ENST00000245544 FRAT1Q92837 279 aaPredicted RBP17.38■□□□□ 0.37
NUP85-201ENST00000245544 MSH6P52701 1360 aa17.38■□□□□ 0.37
NUP85-201ENST00000245544 KCNH5Q8NCM2 988 aa17.37■□□□□ 0.37
NUP85-201ENST00000245544 IP6K1Q92551 441 aa17.37■□□□□ 0.37
NUP85-201ENST00000245544 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
NUP85-201ENST00000245544 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
NUP85-201ENST00000245544 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
NUP85-201ENST00000245544 MTHFSDQ2M296 383 aaKnown RBP17.35■□□□□ 0.37
NUP85-201ENST00000245544 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
NUP85-201ENST00000245544 SLIT3O75094 1523 aa17.35■□□□□ 0.37
NUP85-201ENST00000245544 MCM10Q7L590 875 aa17.35■□□□□ 0.37
NUP85-201ENST00000245544 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
NUP85-201ENST00000245544 USP19O94966 1318 aa17.34■□□□□ 0.37
NUP85-201ENST00000245544 ALS2Q96Q42 1657 aa17.34■□□□□ 0.37
NUP85-201ENST00000245544 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
NUP85-201ENST00000245544 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
NUP85-201ENST00000245544 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
NUP85-201ENST00000245544 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.37
NUP85-201ENST00000245544 SSH1Q8WYL5 1049 aa17.33■□□□□ 0.37
NUP85-201ENST00000245544 IFT57Q9NWB7 429 aa17.33■□□□□ 0.37
NUP85-201ENST00000245544 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
NUP85-201ENST00000245544 RLBP1P12271 317 aa17.32■□□□□ 0.36
NUP85-201ENST00000245544 GNAI1P63096 354 aa17.32■□□□□ 0.36
NUP85-201ENST00000245544 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
NUP85-201ENST00000245544 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
NUP85-201ENST00000245544 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
NUP85-201ENST00000245544 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
NUP85-201ENST00000245544 TSPYL6Q8N831 410 aa17.32■□□□□ 0.36
NUP85-201ENST00000245544 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
NUP85-201ENST00000245544 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
NUP85-201ENST00000245544 BRINP3Q76B58 766 aa17.31■□□□□ 0.36
NUP85-201ENST00000245544 LRRC59Q96AG4 307 aaKnown RBP17.31■□□□□ 0.36
NUP85-201ENST00000245544 COG6Q9Y2V7 657 aa17.31■□□□□ 0.36
NUP85-201ENST00000245544 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
NUP85-201ENST00000245544 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
NUP85-201ENST00000245544 SMC4Q9NTJ3 1288 aa17.3■□□□□ 0.36
NUP85-201ENST00000245544 AXIN2Q9Y2T1 843 aa17.3■□□□□ 0.36
NUP85-201ENST00000245544 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
NUP85-201ENST00000245544 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
NUP85-201ENST00000245544 CLUAP1Q96AJ1 413 aa17.3■□□□□ 0.36
NUP85-201ENST00000245544 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
NUP85-201ENST00000245544 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
NUP85-201ENST00000245544 PXDNQ92626 1479 aa17.29■□□□□ 0.36
NUP85-201ENST00000245544 VAMP4O75379 141 aa17.28■□□□□ 0.36
NUP85-201ENST00000245544 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
NUP85-201ENST00000245544 SLAIN2Q9P270 581 aa17.27■□□□□ 0.36
NUP85-201ENST00000245544 CRB1P82279 1406 aa17.27■□□□□ 0.36
NUP85-201ENST00000245544 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
NUP85-201ENST00000245544 NOB1Q9ULX3 412 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms