RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ANO2Q9NQ90 1003 aa14.1□□□□□ -0.15
SOX9-201ENST00000245479 ERVK-7P63135 1459 aa14.1□□□□□ -0.15
SOX9-201ENST00000245479 ST18O60284 1047 aa14.1□□□□□ -0.15
SOX9-201ENST00000245479 FCHSD2O94868 740 aa14.1□□□□□ -0.15
SOX9-201ENST00000245479 KCNJ4P48050 445 aa14.1□□□□□ -0.15
SOX9-201ENST00000245479 WASLO00401 505 aaPredicted RBP14.1□□□□□ -0.15
SOX9-201ENST00000245479 PRDM10Q9NQV6 1147 aa14.1□□□□□ -0.15
SOX9-201ENST00000245479 YEATS2Q9ULM3 1422 aa14.09□□□□□ -0.15
SOX9-201ENST00000245479 HDGFP51858 240 aaKnown RBP14.09□□□□□ -0.15
SOX9-201ENST00000245479 ZNF771Q7L3S4 317 aaPredicted RBP14.09□□□□□ -0.15
SOX9-201ENST00000245479 MEIS3Q99687 375 aa14.09□□□□□ -0.15
SOX9-201ENST00000245479 CDC42BPBQ9Y5S2 1711 aa14.08□□□□□ -0.15
SOX9-201ENST00000245479 HAP1P54257 671 aaPredicted RBP14.08□□□□□ -0.16
SOX9-201ENST00000245479 JARID2Q92833 1246 aaPredicted RBP14.08□□□□□ -0.16
SOX9-201ENST00000245479 CSB-PGBD3P0DP91 1061 aa14.08□□□□□ -0.16
SOX9-201ENST00000245479 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.16
SOX9-201ENST00000245479 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.16
SOX9-201ENST00000245479 CHD1O14646 1710 aa14.07□□□□□ -0.16
SOX9-201ENST00000245479 MCCP23508 829 aa14.07□□□□□ -0.16
SOX9-201ENST00000245479 BCL11BQ9C0K0 894 aaPredicted RBP14.07□□□□□ -0.16
SOX9-201ENST00000245479 NUCB2P80303 420 aa14.07□□□□□ -0.16
SOX9-201ENST00000245479 AAMPQ13685 434 aa14.07□□□□□ -0.16
SOX9-201ENST00000245479 ESCO1Q5FWF5 840 aa14.07□□□□□ -0.16
SOX9-201ENST00000245479 UPF3BQ9BZI7 483 aaKnown RBP14.07□□□□□ -0.16
SOX9-201ENST00000245479 GOLGA6L4A6NEF3 574 aa14.06□□□□□ -0.16
SOX9-201ENST00000245479 PIP4K2AP48426 406 aaPredicted RBP14.06□□□□□ -0.16
SOX9-201ENST00000245479 G2E3Q7L622 706 aa14.06□□□□□ -0.16
SOX9-201ENST00000245479 POLR3AO14802 1390 aaPredicted RBP14.06□□□□□ -0.16
SOX9-201ENST00000245479 ACEP12821 1306 aa14.06□□□□□ -0.16
SOX9-201ENST00000245479 VAMP4O75379 141 aa14.06□□□□□ -0.16
SOX9-201ENST00000245479 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
SOX9-201ENST00000245479 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
SOX9-201ENST00000245479 TRMT2AQ8IZ69 625 aaKnown RBP14.06□□□□□ -0.16
SOX9-201ENST00000245479 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 PSME1Q06323 249 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 NUTM1Q86Y26 1132 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 CCDC39Q9UFE4 941 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 ANKRD36BQ8N2N9 1353 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 PIK3C2GO75747 1445 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 PHF14O94880 888 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 TBC1D9Q6ZT07 1266 aa14.05□□□□□ -0.16
SOX9-201ENST00000245479 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
SOX9-201ENST00000245479 ZHX1Q9UKY1 873 aaPredicted RBP14.05□□□□□ -0.16
SOX9-201ENST00000245479 PRDM15P57071 1507 aaPredicted RBP14.04□□□□□ -0.16
SOX9-201ENST00000245479 AMOTL2Q9Y2J4 779 aa14.04□□□□□ -0.16
SOX9-201ENST00000245479 PRPF40AO75400 957 aaKnown RBP14.04□□□□□ -0.16
SOX9-201ENST00000245479 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
SOX9-201ENST00000245479 NEK4P51957 841 aa14.04□□□□□ -0.16
SOX9-201ENST00000245479 ZC3H6P61129 1189 aaKnown RBP14.04□□□□□ -0.16
SOX9-201ENST00000245479 SSFA2P28290 1259 aa14.03□□□□□ -0.16
SOX9-201ENST00000245479 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
SOX9-201ENST00000245479 ADCY10Q96PN6 1610 aa14.03□□□□□ -0.16
SOX9-201ENST00000245479 SURF6O75683 361 aaKnown RBP14.03□□□□□ -0.16
SOX9-201ENST00000245479 FOSBP53539 338 aa14.03□□□□□ -0.16
SOX9-201ENST00000245479 TNPO1Q92973 898 aaKnown RBP14.03□□□□□ -0.16
SOX9-201ENST00000245479 SIL1Q9H173 461 aa14.03□□□□□ -0.16
SOX9-201ENST00000245479 ZBTB40Q9NUA8 1239 aa14.03□□□□□ -0.16
SOX9-201ENST00000245479 PPFIA3O75145 1194 aa14.03□□□□□ -0.16
SOX9-201ENST00000245479 TEFQ10587 303 aa14.02□□□□□ -0.16
SOX9-201ENST00000245479 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
SOX9-201ENST00000245479 ARHGEF5Q12774 1597 aa14.02□□□□□ -0.17
SOX9-201ENST00000245479 MPRIPQ6WCQ1 1025 aa14.01□□□□□ -0.17
SOX9-201ENST00000245479 TNNT3P45378 269 aaPredicted RBP14.01□□□□□ -0.17
SOX9-201ENST00000245479 ZRSR1Q15695 479 aaKnown RBP14.01□□□□□ -0.17
SOX9-201ENST00000245479 GDPD2Q9HCC8 539 aa14.01□□□□□ -0.17
SOX9-201ENST00000245479 GOLGA6L6A8MZA4 724 aa14.01□□□□□ -0.17
SOX9-201ENST00000245479 PREX2Q70Z35 1606 aa14.01□□□□□ -0.17
SOX9-201ENST00000245479 CCDC27Q2M243 656 aa14□□□□□ -0.17
SOX9-201ENST00000245479 CD2BP2O95400 341 aaKnown RBP14□□□□□ -0.17
SOX9-201ENST00000245479 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
SOX9-201ENST00000245479 ZNF518AQ6AHZ1 1483 aa14□□□□□ -0.17
SOX9-201ENST00000245479 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
SOX9-201ENST00000245479 MRPL50Q8N5N7 158 aaKnown RBP14□□□□□ -0.17
SOX9-201ENST00000245479 HDGFL1Q5TGJ6 251 aa13.99□□□□□ -0.17
SOX9-201ENST00000245479 PLEKHF1Q96S99 279 aa13.99□□□□□ -0.17
SOX9-201ENST00000245479 INSRP06213 1382 aa13.99□□□□□ -0.17
SOX9-201ENST00000245479 USP19O94966 1318 aa13.99□□□□□ -0.17
SOX9-201ENST00000245479 CDC45O75419 566 aa13.99□□□□□ -0.17
SOX9-201ENST00000245479 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
SOX9-201ENST00000245479 HMMRO75330 724 aa13.99□□□□□ -0.17
SOX9-201ENST00000245479 MYL6BP14649 208 aa13.99□□□□□ -0.17
SOX9-201ENST00000245479 MTHFSDQ2M296 383 aaKnown RBP13.99□□□□□ -0.17
SOX9-201ENST00000245479 KDM4AO75164 1064 aa13.98□□□□□ -0.17
SOX9-201ENST00000245479 C9orf78Q9NZ63 289 aaPredicted RBP13.98□□□□□ -0.17
SOX9-201ENST00000245479 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
SOX9-201ENST00000245479 ZBTB7BO15156 539 aaPredicted RBP13.98□□□□□ -0.17
SOX9-201ENST00000245479 CLTCL1P53675 1640 aa13.98□□□□□ -0.17
SOX9-201ENST00000245479 HMGN5P82970 282 aaKnown RBP13.97□□□□□ -0.17
SOX9-201ENST00000245479 FGD1P98174 961 aa13.97□□□□□ -0.17
SOX9-201ENST00000245479 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
SOX9-201ENST00000245479 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
SOX9-201ENST00000245479 PPIP5K1Q6PFW1 1433 aa13.97□□□□□ -0.17
SOX9-201ENST00000245479 LTKP29376 864 aa13.97□□□□□ -0.17
SOX9-201ENST00000245479 NUCB1Q02818 461 aa13.97□□□□□ -0.17
SOX9-201ENST00000245479 ABCC1P33527 1531 aa13.97□□□□□ -0.17
SOX9-201ENST00000245479 CCDC85AQ96PX6 553 aaPredicted RBP13.96□□□□□ -0.17
SOX9-201ENST00000245479 LRRFIP2Q9Y608 721 aaKnown RBP13.96□□□□□ -0.17
SOX9-201ENST00000245479 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.17
SOX9-201ENST00000245479 CBX1P83916 185 aa13.96□□□□□ -0.17
SOX9-201ENST00000245479 GAS2L2Q8NHY3 880 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms