RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
COPA-201ENST00000241704 HSP90B1P14625 803 aaKnown RBP13.3□□□□□ -0.28
COPA-201ENST00000241704 HMGN5P82970 282 aaKnown RBP13.3□□□□□ -0.28
COPA-201ENST00000241704 ADAMTS2O95450 1211 aa13.3□□□□□ -0.28
COPA-201ENST00000241704 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
COPA-201ENST00000241704 UHRF1BP1Q6BDS2 1440 aa13.3□□□□□ -0.28
COPA-201ENST00000241704 REC8O95072 547 aa13.3□□□□□ -0.28
COPA-201ENST00000241704 TRIM34Q9BYJ4 488 aa13.3□□□□□ -0.28
COPA-201ENST00000241704 ATP7AQ04656 1500 aa13.3□□□□□ -0.28
COPA-201ENST00000241704 EIF2AK4Q9P2K8 1649 aaKnown RBP13.3□□□□□ -0.28
COPA-201ENST00000241704 UBTFL1P0CB47 393 aaPredicted RBP13.29□□□□□ -0.28
COPA-201ENST00000241704 G3BP1Q13283 466 aaKnown RBP eCLIP13.29□□□□□ -0.283e-7■■■□□ 17.7
COPA-201ENST00000241704 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
COPA-201ENST00000241704 SPG7Q9UQ90 795 aa13.29□□□□□ -0.28
COPA-201ENST00000241704 TNNT3P45378 269 aaPredicted RBP13.29□□□□□ -0.28
COPA-201ENST00000241704 CABP4P57796 275 aa13.29□□□□□ -0.28
COPA-201ENST00000241704 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
COPA-201ENST00000241704 SASS6Q6UVJ0 657 aa13.29□□□□□ -0.28
COPA-201ENST00000241704 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
COPA-201ENST00000241704 AMOTL1Q8IY63 956 aa13.28□□□□□ -0.28
COPA-201ENST00000241704 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
COPA-201ENST00000241704 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
COPA-201ENST00000241704 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
COPA-201ENST00000241704 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
COPA-201ENST00000241704 TERF1P54274 439 aa13.28□□□□□ -0.28
COPA-201ENST00000241704 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
COPA-201ENST00000241704 MBD5Q9P267 1494 aa13.27□□□□□ -0.28
COPA-201ENST00000241704 MVPQ14764 893 aaKnown RBP13.27□□□□□ -0.28
COPA-201ENST00000241704 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
COPA-201ENST00000241704 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.29
COPA-201ENST00000241704 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.29
COPA-201ENST00000241704 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.29
COPA-201ENST00000241704 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.29
COPA-201ENST00000241704 ANKRD36BQ8N2N9 1353 aa13.27□□□□□ -0.29
COPA-201ENST00000241704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.294e-9■■■■■ 40.6
COPA-201ENST00000241704 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
COPA-201ENST00000241704 PDZRN3Q9UPQ7 1066 aa13.26□□□□□ -0.29
COPA-201ENST00000241704 RAD21O60216 631 aa13.26□□□□□ -0.29
COPA-201ENST00000241704 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
COPA-201ENST00000241704 FSD2A1L4K1 749 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 TBC1D32Q96NH3 1257 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 UBAP1LF5GYI3 381 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 KDM2BQ8NHM5 1336 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 ASXL1Q8IXJ9 1541 aa13.25□□□□□ -0.29
COPA-201ENST00000241704 NOL8Q76FK4 1167 aaKnown RBP13.25□□□□□ -0.29
COPA-201ENST00000241704 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
COPA-201ENST00000241704 TOM1O60784 492 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 APPP05067 770 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 CCT4P50991 539 aaKnown RBP13.24□□□□□ -0.29
COPA-201ENST00000241704 CCDC66A2RUB6 948 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 PHF14O94880 888 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 CAVIN1Q6NZI2 390 aaKnown RBP13.24□□□□□ -0.29
COPA-201ENST00000241704 GCC2Q8IWJ2 1684 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 FYB1O15117 783 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 VPS53Q5VIR6 699 aa13.24□□□□□ -0.29
COPA-201ENST00000241704 RARSP54136 660 aaKnown RBP13.23□□□□□ -0.29
COPA-201ENST00000241704 NUCB2P80303 420 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 CBX1P83916 185 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 ACEP12821 1306 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 NRDCO43847 1150 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
COPA-201ENST00000241704 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
COPA-201ENST00000241704 NEO1Q92859 1461 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 MARCH6O60337 910 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 GNAI2P04899 355 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 ZMYM3Q14202 1370 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 ERC2O15083 957 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
COPA-201ENST00000241704 RASSF8Q8NHQ8 419 aa13.23□□□□□ -0.29
COPA-201ENST00000241704 GTPBP4Q9BZE4 634 aaKnown RBP13.23□□□□□ -0.29
COPA-201ENST00000241704 CTDP1Q9Y5B0 961 aaPredicted RBP13.23□□□□□ -0.29
COPA-201ENST00000241704 CCDC94Q9BW85 323 aaPredicted RBP13.22□□□□□ -0.29
COPA-201ENST00000241704 ATP10AO60312 1499 aa13.22□□□□□ -0.29
COPA-201ENST00000241704 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
COPA-201ENST00000241704 MCM5P33992 734 aa13.22□□□□□ -0.29
COPA-201ENST00000241704 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
COPA-201ENST00000241704 GOLGA6L6A8MZA4 724 aa13.22□□□□□ -0.29
COPA-201ENST00000241704 PER1O15534 1290 aaPredicted RBP13.22□□□□□ -0.29
COPA-201ENST00000241704 PDIA4P13667 645 aaKnown RBP13.22□□□□□ -0.29
COPA-201ENST00000241704 CDC45O75419 566 aa13.21□□□□□ -0.29
COPA-201ENST00000241704 SURF6O75683 361 aaKnown RBP13.21□□□□□ -0.29
COPA-201ENST00000241704 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
COPA-201ENST00000241704 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
COPA-201ENST00000241704 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.3
COPA-201ENST00000241704 TTC21BQ7Z4L5 1316 aa13.21□□□□□ -0.3
COPA-201ENST00000241704 HSPA2P54652 639 aa13.21□□□□□ -0.3
COPA-201ENST00000241704 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.3
COPA-201ENST00000241704 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.3
COPA-201ENST00000241704 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.3
COPA-201ENST00000241704 ANO2Q9NQ90 1003 aa13.21□□□□□ -0.3
COPA-201ENST00000241704 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
COPA-201ENST00000241704 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms