RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 ARHGAP29Q52LW3 1261 aa7.96□□□□□ -1.14
CSMD2-201ENST00000241312 IKQ13123 557 aaPredicted RBP7.96□□□□□ -1.14
CSMD2-201ENST00000241312 WWC2Q6AWC2 1192 aa7.96□□□□□ -1.14
CSMD2-201ENST00000241312 CFAP45Q9UL16 551 aa7.96□□□□□ -1.14
CSMD2-201ENST00000241312 LRRC9Q6ZRR7 1453 aa7.96□□□□□ -1.14
CSMD2-201ENST00000241312 DESP17661 470 aa7.96□□□□□ -1.14
CSMD2-201ENST00000241312 SURF6O75683 361 aaKnown RBP7.95□□□□□ -1.14
CSMD2-201ENST00000241312 GNAI2P04899 355 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 CCT4P50991 539 aaKnown RBP7.95□□□□□ -1.14
CSMD2-201ENST00000241312 C1orf115Q9H7X2 142 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 CDCA7LQ96GN5 454 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 AKNAQ7Z591 1439 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 DNAJC2Q99543 621 aaKnown RBP7.95□□□□□ -1.14
CSMD2-201ENST00000241312 SFPQP23246 707 aaKnown RBP eCLIP7.95□□□□□ -1.14
CSMD2-201ENST00000241312 PLEKHH1Q9ULM0 1364 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 SPATA32Q96LK8 384 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 PPP6R1Q9UPN7 881 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 MTMR7Q9Y216 660 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 ATP2B1P20020 1258 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 SAMD1Q6SPF0 538 aaPredicted RBP7.95□□□□□ -1.14
CSMD2-201ENST00000241312 ADAMTS8Q9UP79 889 aa7.95□□□□□ -1.14
CSMD2-201ENST00000241312 CEBPZQ03701 1054 aaKnown RBP7.94□□□□□ -1.14
CSMD2-201ENST00000241312 CASKIN1Q8WXD9 1431 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 NLRP2Q9NX02 1062 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 GPRASP1Q5JY77 1395 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 KIF6Q6ZMV9 814 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 RUSC2Q8N2Y8 1516 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 MCM3P25205 808 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 NOL7Q9UMY1 257 aaKnown RBP7.94□□□□□ -1.14
CSMD2-201ENST00000241312 NCOA2Q15596 1464 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 EPB41L2O43491 1005 aaKnown RBP7.94□□□□□ -1.14
CSMD2-201ENST00000241312 FAM193AP78312 1265 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 TAX1BP1Q86VP1 789 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 EFCAB5A4FU69 1503 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 TCP11L2Q8N4U5 519 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 FAM107BQ9H098 131 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 ZSCAN31Q96LW9 406 aaPredicted RBP7.94□□□□□ -1.14
CSMD2-201ENST00000241312 UPF3BQ9BZI7 483 aaKnown RBP7.94□□□□□ -1.14
CSMD2-201ENST00000241312 JAKMIP3Q5VZ66 844 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 UBXN4Q92575 508 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 PDZRN3Q9UPQ7 1066 aa7.94□□□□□ -1.14
CSMD2-201ENST00000241312 ZSCAN30Q86W11 494 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 NUP62CLQ9H1M0 184 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 GBP3Q9H0R5 595 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 WASF1Q92558 559 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 AIMP1Q12904 312 aaKnown RBP7.93□□□□□ -1.14
CSMD2-201ENST00000241312 IMMTQ16891 758 aaKnown RBP7.93□□□□□ -1.14
CSMD2-201ENST00000241312 LARP1BQ659C4 914 aaKnown RBP7.93□□□□□ -1.14
CSMD2-201ENST00000241312 STK11IPQ8N1F8 1099 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 LRRFIP2Q9Y608 721 aaKnown RBP7.93□□□□□ -1.14
CSMD2-201ENST00000241312 SHTN1A0MZ66 631 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 PPP1R12BO60237 982 aaPredicted RBP7.93□□□□□ -1.14
CSMD2-201ENST00000241312 CCDC148Q8NFR7 591 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 KRT32Q14532 448 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 HFM1A2PYH4 1435 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 CCDC158Q5M9N0 1113 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 CCDC91Q7Z6B0 441 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 KIAA1328Q86T90 577 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 BACH2Q9BYV9 841 aa7.93□□□□□ -1.14
CSMD2-201ENST00000241312 CRACR2AQ9BSW2 395 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 TTC39AQ5SRH9 613 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 TAF4BQ92750 862 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 PDCL3Q9H2J4 239 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 ANKRD62A6NC57 917 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 TMCO3Q6UWJ1 677 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 BMP2KQ9NSY1 1161 aaPredicted RBP7.92□□□□□ -1.14
CSMD2-201ENST00000241312 TANGO6Q9C0B7 1094 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 CCDC69A6NI79 296 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 DDX11Q96FC9 970 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 SMTNL1A8MU46 457 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 VPS36Q86VN1 386 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 GIMAP7Q8NHV1 300 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 CTNNA3Q9UI47 895 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 ERICH4A6NGS2 130 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 CCDC57Q2TAC2 916 aa7.92□□□□□ -1.14
CSMD2-201ENST00000241312 SEPT11Q9NVA2 429 aaKnown RBP7.91□□□□□ -1.14
CSMD2-201ENST00000241312 ZNF397Q8NF99 534 aaPredicted RBP7.91□□□□□ -1.14
CSMD2-201ENST00000241312 JPH4Q96JJ6 628 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 GON4LQ3T8J9 2241 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 TRIM21P19474 475 aaKnown RBP7.91□□□□□ -1.14
CSMD2-201ENST00000241312 TWISTNBQ3B726 338 aaPredicted RBP7.91□□□□□ -1.14
CSMD2-201ENST00000241312 PRDM10Q9NQV6 1147 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 FGD5Q6ZNL6 1462 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 KIF18AQ8NI77 898 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 ZSCAN12O43309 604 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 MEX3CQ5U5Q3 659 aaKnown RBP7.91□□□□□ -1.14
CSMD2-201ENST00000241312 PRKAR2BP31323 418 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 MTHFSP49914 203 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 UBAC1Q9BSL1 405 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 CEP131Q9UPN4 1083 aa7.91□□□□□ -1.14
CSMD2-201ENST00000241312 MVPQ14764 893 aaKnown RBP7.9□□□□□ -1.14
CSMD2-201ENST00000241312 NUTM2GQ5VZR2 741 aa7.9□□□□□ -1.14
CSMD2-201ENST00000241312 POTEJP0CG39 1038 aa7.9□□□□□ -1.14
CSMD2-201ENST00000241312 EIF5P55010 431 aaKnown RBP7.9□□□□□ -1.14
CSMD2-201ENST00000241312 SPA17Q15506 151 aa7.9□□□□□ -1.14
CSMD2-201ENST00000241312 POTEB2H3BUK9 544 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms