RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CDC45O75419 566 aa19.26■□□□□ 0.67
DDX55-201ENST00000238146 POGZQ7Z3K3 1410 aa19.26■□□□□ 0.67
DDX55-201ENST00000238146 GOLGA6L22H0YM25 854 aa19.26■□□□□ 0.67
DDX55-201ENST00000238146 IDI1Q13907 227 aa19.26■□□□□ 0.67
DDX55-201ENST00000238146 PHACTR3Q96KR7 559 aa19.26■□□□□ 0.67
DDX55-201ENST00000238146 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
DDX55-201ENST00000238146 ABCC4O15439 1325 aa19.25■□□□□ 0.67
DDX55-201ENST00000238146 PTPRMP28827 1452 aa19.25■□□□□ 0.67
DDX55-201ENST00000238146 BAG4O95429 457 aaKnown RBP19.25■□□□□ 0.67
DDX55-201ENST00000238146 KLHL40Q2TBA0 621 aa19.25■□□□□ 0.67
DDX55-201ENST00000238146 GLIPR1L2Q4G1C9 344 aa19.25■□□□□ 0.67
DDX55-201ENST00000238146 PPP1R9BQ96SB3 815 aa19.25■□□□□ 0.67
DDX55-201ENST00000238146 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
DDX55-201ENST00000238146 CDC42BPGQ6DT37 1551 aa19.25■□□□□ 0.67
DDX55-201ENST00000238146 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
DDX55-201ENST00000238146 FBLN1P23142 703 aa19.24■□□□□ 0.67
DDX55-201ENST00000238146 CCDC173Q0VFZ6 552 aa19.24■□□□□ 0.67
DDX55-201ENST00000238146 NFE2L2Q16236 605 aa19.24■□□□□ 0.67
DDX55-201ENST00000238146 DDX49Q9Y6V7 483 aaKnown RBP19.24■□□□□ 0.67
DDX55-201ENST00000238146 ELL2O00472 640 aaPredicted RBP19.24■□□□□ 0.67
DDX55-201ENST00000238146 GSPT1P15170 499 aaKnown RBP19.24■□□□□ 0.67
DDX55-201ENST00000238146 NASPP49321 788 aaPredicted RBP19.24■□□□□ 0.67
DDX55-201ENST00000238146 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
DDX55-201ENST00000238146 POLKQ9UBT6 870 aa19.23■□□□□ 0.67
DDX55-201ENST00000238146 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
DDX55-201ENST00000238146 HMOX1P09601 288 aa19.22■□□□□ 0.67
DDX55-201ENST00000238146 GNAI1P63096 354 aa19.21■□□□□ 0.67
DDX55-201ENST00000238146 PLEKHM2Q8IWE5 1019 aa19.21■□□□□ 0.67
DDX55-201ENST00000238146 MBIPQ9NS73 344 aa19.21■□□□□ 0.67
DDX55-201ENST00000238146 IFT57Q9NWB7 429 aa19.21■□□□□ 0.67
DDX55-201ENST00000238146 REREQ9P2R6 1566 aa19.21■□□□□ 0.67
DDX55-201ENST00000238146 ZNF853P0CG23 659 aa19.21■□□□□ 0.67
DDX55-201ENST00000238146 CALD1Q05682 793 aaKnown RBP19.21■□□□□ 0.67
DDX55-201ENST00000238146 RABEP1Q15276 862 aa19.2■□□□□ 0.66
DDX55-201ENST00000238146 CDK19Q9BWU1 502 aa19.2■□□□□ 0.66
DDX55-201ENST00000238146 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
DDX55-201ENST00000238146 ARHGAP31Q2M1Z3 1444 aa19.2■□□□□ 0.66
DDX55-201ENST00000238146 TWISTNBQ3B726 338 aaPredicted RBP19.19■□□□□ 0.66
DDX55-201ENST00000238146 YTHDC2Q9H6S0 1430 aaKnown RBP19.19■□□□□ 0.66
DDX55-201ENST00000238146 ZSCAN30Q86W11 494 aa19.18■□□□□ 0.66
DDX55-201ENST00000238146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.18■□□□□ 0.66
DDX55-201ENST00000238146 TPM2P07951 284 aa19.18■□□□□ 0.66
DDX55-201ENST00000238146 C8orf58Q8NAV2 365 aa19.18■□□□□ 0.66
DDX55-201ENST00000238146 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
DDX55-201ENST00000238146 DCTPP1Q9H773 170 aa19.18■□□□□ 0.66
DDX55-201ENST00000238146 CYP2E1P05181 493 aaPredicted RBP19.17■□□□□ 0.66
DDX55-201ENST00000238146 ZNF445P59923 1031 aa19.17■□□□□ 0.66
DDX55-201ENST00000238146 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
DDX55-201ENST00000238146 ANP32BQ92688 251 aaKnown RBP19.17■□□□□ 0.66
DDX55-201ENST00000238146 USP26Q9BXU7 913 aa19.17■□□□□ 0.66
DDX55-201ENST00000238146 SLC52A1Q9NWF4 448 aa19.17■□□□□ 0.66
DDX55-201ENST00000238146 NUCB2P80303 420 aa19.17■□□□□ 0.66
DDX55-201ENST00000238146 TTC22Q5TAA0 569 aa19.17■□□□□ 0.66
DDX55-201ENST00000238146 KIF20BQ96Q89 1820 aa19.16■□□□□ 0.66
DDX55-201ENST00000238146 AK9Q5TCS8 1911 aa19.16■□□□□ 0.66
DDX55-201ENST00000238146 C16orf71Q8IYS4 520 aaPredicted RBP19.16■□□□□ 0.66
DDX55-201ENST00000238146 LMBRD1Q9NUN5 540 aa19.16■□□□□ 0.66
DDX55-201ENST00000238146 ARHGEF40Q8TER5 1519 aa19.16■□□□□ 0.66
DDX55-201ENST00000238146 CFAP44Q96MT7 982 aa19.15■□□□□ 0.66
DDX55-201ENST00000238146 PKP1Q13835 747 aa19.15■□□□□ 0.66
DDX55-201ENST00000238146 KIAA1211Q6ZU35 1233 aa19.15■□□□□ 0.66
DDX55-201ENST00000238146 CAVIN1Q6NZI2 390 aaKnown RBP19.14■□□□□ 0.65
DDX55-201ENST00000238146 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
DDX55-201ENST00000238146 IL13P35225 146 aa19.14■□□□□ 0.65
DDX55-201ENST00000238146 EMILIN1Q9Y6C2 1016 aa19.14■□□□□ 0.65
DDX55-201ENST00000238146 KNDC1Q76NI1 1749 aa19.13■□□□□ 0.65
DDX55-201ENST00000238146 ZSCAN23Q3MJ62 389 aa19.13■□□□□ 0.65
DDX55-201ENST00000238146 KIF24Q5T7B8 1368 aa19.13■□□□□ 0.65
DDX55-201ENST00000238146 NCLP19338 710 aaKnown RBP19.13■□□□□ 0.65
DDX55-201ENST00000238146 YEATS2Q9ULM3 1422 aa19.13■□□□□ 0.65
DDX55-201ENST00000238146 OFD1O75665 1012 aa19.12■□□□□ 0.65
DDX55-201ENST00000238146 RAPGEF3O95398 923 aa19.12■□□□□ 0.65
DDX55-201ENST00000238146 INTS3Q68E01 1043 aaKnown RBP19.12■□□□□ 0.65
DDX55-201ENST00000238146 OTUD7AQ8TE49 926 aaPredicted RBP19.12■□□□□ 0.65
DDX55-201ENST00000238146 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
DDX55-201ENST00000238146 MSNP26038 577 aaKnown RBP19.11■□□□□ 0.65
DDX55-201ENST00000238146 CWC22Q9HCG8 908 aaKnown RBP19.1■□□□□ 0.65
DDX55-201ENST00000238146 FAM83GA6ND36 823 aa19.1■□□□□ 0.65
DDX55-201ENST00000238146 ANKRD44Q8N8A2 993 aa19.1■□□□□ 0.65
DDX55-201ENST00000238146 RBSNQ9H1K0 784 aa19.1■□□□□ 0.65
DDX55-201ENST00000238146 MAP2P11137 1827 aaKnown RBP19.1■□□□□ 0.65
DDX55-201ENST00000238146 ZGPATQ8N5A5 531 aaKnown RBP19.09■□□□□ 0.65
DDX55-201ENST00000238146 SDSP20132 328 aa19.09■□□□□ 0.65
DDX55-201ENST00000238146 LMOD3Q0VAK6 560 aa19.09■□□□□ 0.65
DDX55-201ENST00000238146 TMEM131LA2VDJ0 1609 aa19.09■□□□□ 0.65
DDX55-201ENST00000238146 ZMYND15Q9H091 742 aa19.08■□□□□ 0.65
DDX55-201ENST00000238146 ATP10DQ9P241 1426 aa19.08■□□□□ 0.65
DDX55-201ENST00000238146 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
DDX55-201ENST00000238146 HS1BP3Q53T59 392 aa19.08■□□□□ 0.64
DDX55-201ENST00000238146 PRPF40AO75400 957 aaKnown RBP19.08■□□□□ 0.64
DDX55-201ENST00000238146 NPM1P06748 294 aaKnown RBP eCLIP19.08■□□□□ 0.64
DDX55-201ENST00000238146 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.64
DDX55-201ENST00000238146 DCTN1Q14203 1278 aa19.08■□□□□ 0.64
DDX55-201ENST00000238146 PDLIM2Q96JY6 352 aa19.08■□□□□ 0.64
DDX55-201ENST00000238146 ZDHHC9Q9Y397 364 aa19.08■□□□□ 0.64
DDX55-201ENST00000238146 ST18O60284 1047 aa19.07■□□□□ 0.64
DDX55-201ENST00000238146 GPT2Q8TD30 523 aa19.07■□□□□ 0.64
DDX55-201ENST00000238146 ATP7BP35670 1465 aa19.07■□□□□ 0.64
DDX55-201ENST00000238146 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.07■□□□□ 0.64
DDX55-201ENST00000238146 RPAP2Q8IXW5 612 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms