RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.7■□□□□ 0.74
CTSD-201ENST00000236671 TBC1D2Q9BYX2 928 aa19.7■□□□□ 0.74
CTSD-201ENST00000236671 DDX19BQ9UMR2 479 aa19.7■□□□□ 0.74
CTSD-201ENST00000236671 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
CTSD-201ENST00000236671 NALCNQ8IZF0 1738 aa19.69■□□□□ 0.74
CTSD-201ENST00000236671 CDC42BPGQ6DT37 1551 aa19.69■□□□□ 0.74
CTSD-201ENST00000236671 CPS1P31327 1500 aa19.68■□□□□ 0.74
CTSD-201ENST00000236671 KIF20BQ96Q89 1820 aa19.68■□□□□ 0.74
CTSD-201ENST00000236671 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
CTSD-201ENST00000236671 NOB1Q9ULX3 412 aaKnown RBP19.67■□□□□ 0.74
CTSD-201ENST00000236671 RIPK4P57078 832 aa19.67■□□□□ 0.74
CTSD-201ENST00000236671 NUTM2FA1L443 756 aa19.66■□□□□ 0.74
CTSD-201ENST00000236671 DIAPH1O60610 1272 aaKnown RBP19.66■□□□□ 0.74
CTSD-201ENST00000236671 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
CTSD-201ENST00000236671 TECPR2O15040 1411 aa19.66■□□□□ 0.74
CTSD-201ENST00000236671 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
CTSD-201ENST00000236671 TMEM57Q8N5G2 664 aa19.65■□□□□ 0.74
CTSD-201ENST00000236671 POGKQ9P215 609 aa19.65■□□□□ 0.74
CTSD-201ENST00000236671 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
CTSD-201ENST00000236671 KIF16BQ96L93 1317 aa19.64■□□□□ 0.73
CTSD-201ENST00000236671 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.73
CTSD-201ENST00000236671 HDGFL2Q7Z4V5 671 aaPredicted RBP19.63■□□□□ 0.73
CTSD-201ENST00000236671 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
CTSD-201ENST00000236671 FAM135BQ49AJ0 1406 aa19.62■□□□□ 0.73
CTSD-201ENST00000236671 CDK19Q9BWU1 502 aa19.62■□□□□ 0.73
CTSD-201ENST00000236671 C22orf23Q9BZE7 217 aa19.62■□□□□ 0.73
CTSD-201ENST00000236671 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
CTSD-201ENST00000236671 FCHSD2O94868 740 aa19.6■□□□□ 0.73
CTSD-201ENST00000236671 MFAP1P55081 439 aaKnown RBP19.6■□□□□ 0.73
CTSD-201ENST00000236671 CABP1Q9NZU7 370 aa19.6■□□□□ 0.73
CTSD-201ENST00000236671 RGPD8O14715 1765 aaPredicted RBP19.6■□□□□ 0.73
CTSD-201ENST00000236671 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
CTSD-201ENST00000236671 IPO8O15397 1037 aaKnown RBP19.6■□□□□ 0.73
CTSD-201ENST00000236671 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
CTSD-201ENST00000236671 RSPH6AQ9H0K4 717 aa19.59■□□□□ 0.73
CTSD-201ENST00000236671 CERKQ8TCT0 537 aa19.58■□□□□ 0.73
CTSD-201ENST00000236671 ATP7BP35670 1465 aa19.58■□□□□ 0.72
CTSD-201ENST00000236671 PRKAR2BP31323 418 aa19.57■□□□□ 0.72
CTSD-201ENST00000236671 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
CTSD-201ENST00000236671 NUCB1Q02818 461 aa19.57■□□□□ 0.72
CTSD-201ENST00000236671 POLKQ9UBT6 870 aa19.56■□□□□ 0.72
CTSD-201ENST00000236671 ADGRL3Q9HAR2 1447 aa19.56■□□□□ 0.72
CTSD-201ENST00000236671 ZNF428Q96B54 188 aa19.55■□□□□ 0.72
CTSD-201ENST00000236671 ANO8Q9HCE9 1232 aaPredicted RBP19.55■□□□□ 0.72
CTSD-201ENST00000236671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.54■□□□□ 0.72
CTSD-201ENST00000236671 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
CTSD-201ENST00000236671 FBLN1P23142 703 aa19.53■□□□□ 0.72
CTSD-201ENST00000236671 MSH6P52701 1360 aa19.53■□□□□ 0.72
CTSD-201ENST00000236671 NFE2L2Q16236 605 aa19.52■□□□□ 0.72
CTSD-201ENST00000236671 C19orf44Q9H6X5 657 aa19.52■□□□□ 0.72
CTSD-201ENST00000236671 CHD1LQ86WJ1 897 aa19.52■□□□□ 0.72
CTSD-201ENST00000236671 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
CTSD-201ENST00000236671 CHMP5Q9NZZ3 219 aa19.52■□□□□ 0.72
CTSD-201ENST00000236671 PIP4K2BP78356 416 aa19.51■□□□□ 0.71
CTSD-201ENST00000236671 LNPKQ9C0E8 428 aa19.51■□□□□ 0.71
CTSD-201ENST00000236671 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
CTSD-201ENST00000236671 MCM4P33991 863 aa19.51■□□□□ 0.71
CTSD-201ENST00000236671 SIRT1Q96EB6 747 aa19.51■□□□□ 0.71
CTSD-201ENST00000236671 VAMP4O75379 141 aa19.5■□□□□ 0.71
CTSD-201ENST00000236671 RBM25P49756 843 aaKnown RBP19.5■□□□□ 0.71
CTSD-201ENST00000236671 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
CTSD-201ENST00000236671 MAP2P11137 1827 aaKnown RBP19.5■□□□□ 0.71
CTSD-201ENST00000236671 DDX17Q92841 729 aaKnown RBP19.49■□□□□ 0.71
CTSD-201ENST00000236671 PRR36Q9H6K5 1346 aa19.49■□□□□ 0.71
CTSD-201ENST00000236671 FMN2Q9NZ56 1722 aa19.49■□□□□ 0.71
CTSD-201ENST00000236671 CDK12Q9NYV4 1490 aaPredicted RBP19.49■□□□□ 0.71
CTSD-201ENST00000236671 UBAP1LF5GYI3 381 aa19.49■□□□□ 0.71
CTSD-201ENST00000236671 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
CTSD-201ENST00000236671 HMOX1P09601 288 aa19.49■□□□□ 0.71
CTSD-201ENST00000236671 ATF3P18847 181 aa19.49■□□□□ 0.71
CTSD-201ENST00000236671 THUMPD2Q9BTF0 503 aaKnown RBP19.49■□□□□ 0.71
CTSD-201ENST00000236671 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
CTSD-201ENST00000236671 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
CTSD-201ENST00000236671 CPSF1Q10570 1443 aaKnown RBP19.48■□□□□ 0.71
CTSD-201ENST00000236671 L1TD1Q5T7N2 865 aaKnown RBP19.48■□□□□ 0.71
CTSD-201ENST00000236671 HSCBQ8IWL3 235 aa19.48■□□□□ 0.71
CTSD-201ENST00000236671 FAM43AQ8N2R8 423 aa19.48■□□□□ 0.71
CTSD-201ENST00000236671 ARHGAP45Q92619 1136 aa19.48■□□□□ 0.71
CTSD-201ENST00000236671 ORAI2Q96SN7 254 aa19.48■□□□□ 0.71
CTSD-201ENST00000236671 EDC4Q6P2E9 1401 aaKnown RBP19.48■□□□□ 0.71
CTSD-201ENST00000236671 CALD1Q05682 793 aaKnown RBP19.48■□□□□ 0.71
CTSD-201ENST00000236671 BMP2KLQ5H9B9 411 aa19.48■□□□□ 0.71
CTSD-201ENST00000236671 IFT57Q9NWB7 429 aa19.48■□□□□ 0.71
CTSD-201ENST00000236671 IL13P35225 146 aa19.47■□□□□ 0.71
CTSD-201ENST00000236671 TSPYL6Q8N831 410 aa19.47■□□□□ 0.71
CTSD-201ENST00000236671 EMILIN1Q9Y6C2 1016 aa19.47■□□□□ 0.71
CTSD-201ENST00000236671 MST1RQ04912 1400 aa19.47■□□□□ 0.71
CTSD-201ENST00000236671 ZNF853P0CG23 659 aa19.46■□□□□ 0.71
CTSD-201ENST00000236671 GNAI1P63096 354 aa19.46■□□□□ 0.71
CTSD-201ENST00000236671 ABCC4O15439 1325 aa19.46■□□□□ 0.71
CTSD-201ENST00000236671 DDIT3P35638 169 aa19.45■□□□□ 0.7
CTSD-201ENST00000236671 SNX21Q969T3 373 aa19.45■□□□□ 0.7
CTSD-201ENST00000236671 GCC1Q96CN9 775 aa19.45■□□□□ 0.7
CTSD-201ENST00000236671 SLAIN2Q9P270 581 aa19.45■□□□□ 0.7
CTSD-201ENST00000236671 CHMP4BQ9H444 224 aaKnown RBP19.45■□□□□ 0.7
CTSD-201ENST00000236671 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
CTSD-201ENST00000236671 MBIPQ9NS73 344 aa19.45■□□□□ 0.7
CTSD-201ENST00000236671 AATKQ6ZMQ8 1374 aa19.44■□□□□ 0.7
CTSD-201ENST00000236671 FSD2A1L4K1 749 aa19.43■□□□□ 0.7
CTSD-201ENST00000236671 CADPS2Q86UW7 1296 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms