RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 PANK1Q8TE04 598 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 CTNNA3Q9UI47 895 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 KIAA0586Q9BVV6 1533 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 CCDC66A2RUB6 948 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 SURF6O75683 361 aaKnown RBP8.58□□□□□ -1.04
CPS1-201ENST00000233072 PRKAR2BP31323 418 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 ANKRD18AQ8IVF6 992 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 SDF4Q9BRK5 362 aa8.58□□□□□ -1.04
CPS1-201ENST00000233072 ZNHIT6Q9NWK9 470 aaKnown RBP8.58□□□□□ -1.04
CPS1-201ENST00000233072 IQCEQ6IPM2 695 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 TXNDC2Q86VQ3 553 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
CPS1-201ENST00000233072 CNNM1Q9NRU3 951 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 PLEKHH1Q9ULM0 1364 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 PTPN23Q9H3S7 1636 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 CABP4P57796 275 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 FAM13BQ9NYF5 915 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 ABCC11Q96J66 1382 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
CPS1-201ENST00000233072 CCDC69A6NI79 296 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 HMGN5P82970 282 aaKnown RBP8.57□□□□□ -1.04
CPS1-201ENST00000233072 ESCO1Q5FWF5 840 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 CDK19Q9BWU1 502 aa8.57□□□□□ -1.04
CPS1-201ENST00000233072 FYB1O15117 783 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 STK38Q15208 465 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 ZRSR2Q15696 482 aaKnown RBP8.56□□□□□ -1.04
CPS1-201ENST00000233072 PDILTQ8N807 584 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 PRAM1Q96QH2 718 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
CPS1-201ENST00000233072 DNAI2Q9GZS0 605 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 IKQ13123 557 aaPredicted RBP8.56□□□□□ -1.04
CPS1-201ENST00000233072 PROSER2Q86WR7 435 aaPredicted RBP8.56□□□□□ -1.04
CPS1-201ENST00000233072 PDZRN3Q9UPQ7 1066 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 ABCA10Q8WWZ4 1543 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 SMC2O95347 1197 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 CCDC192P0DO97 292 aa8.56□□□□□ -1.04
CPS1-201ENST00000233072 EXOSC9Q06265 439 aaKnown RBP8.56□□□□□ -1.04
CPS1-201ENST00000233072 NOB1Q9ULX3 412 aaKnown RBP8.56□□□□□ -1.04
CPS1-201ENST00000233072 NSD2O96028 1365 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 KRT18P05783 430 aaKnown RBP8.55□□□□□ -1.04
CPS1-201ENST00000233072 CAMSAP2Q08AD1 1489 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 DESP17661 470 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 SOGA3Q5TF21 947 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 PCF11O94913 1555 aaKnown RBP8.55□□□□□ -1.04
CPS1-201ENST00000233072 MVPQ14764 893 aaKnown RBP8.55□□□□□ -1.04
CPS1-201ENST00000233072 KCNH5Q8NCM2 988 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 RAB11FIP3O75154 756 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 FCHSD2O94868 740 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 CCDC191Q8NCU4 936 aa8.55□□□□□ -1.04
CPS1-201ENST00000233072 K7ELQ4 463 aaPredicted RBP8.54□□□□□ -1.04
CPS1-201ENST00000233072 TMEM132AQ24JP5 1023 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 TRIM5Q9C035 493 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 FOSBP53539 338 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 TRAK2O60296 914 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 NFKBIBQ15653 356 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 PPP6R1Q9UPN7 881 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 CFAP70Q5T0N1 1121 aa8.54□□□□□ -1.04
CPS1-201ENST00000233072 RPAP2Q8IXW5 612 aaPredicted RBP8.54□□□□□ -1.04
CPS1-201ENST00000233072 MAGI1Q96QZ7 1491 aaPredicted RBP8.54□□□□□ -1.04
CPS1-201ENST00000233072 PPFIBP1Q86W92 1011 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 ANKLE2Q86XL3 938 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 RBM42Q9BTD8 480 aaKnown RBP8.53□□□□□ -1.04
CPS1-201ENST00000233072 TRIM21P19474 475 aaKnown RBP8.53□□□□□ -1.04
CPS1-201ENST00000233072 ZNF287Q9HBT7 754 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 CFAP45Q9UL16 551 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
CPS1-201ENST00000233072 SMTNL1A8MU46 457 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 KRT85P78386 507 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 TMEM132EQ6IEE7 984 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 GOLGA6L10A6NI86 522 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 ERLIN1O75477 346 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 NEK4P51957 841 aa8.53□□□□□ -1.04
CPS1-201ENST00000233072 SLC4A2P04920 1241 aa8.52□□□□□ -1.04
CPS1-201ENST00000233072 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.04
CPS1-201ENST00000233072 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.04
CPS1-201ENST00000233072 ATF7IPQ6VMQ6 1270 aa8.52□□□□□ -1.04
CPS1-201ENST00000233072 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
CPS1-201ENST00000233072 NCOA1Q15788 1441 aa8.52□□□□□ -1.05
CPS1-201ENST00000233072 ALDH1L2Q3SY69 923 aa8.52□□□□□ -1.05
CPS1-201ENST00000233072 ZFYVE27Q5T4F4 411 aa8.52□□□□□ -1.05
CPS1-201ENST00000233072 CHD1LQ86WJ1 897 aa8.52□□□□□ -1.05
CPS1-201ENST00000233072 TNMDQ9H2S6 317 aa8.52□□□□□ -1.05
CPS1-201ENST00000233072 PHAXQ9H814 394 aaKnown RBP8.52□□□□□ -1.05
CPS1-201ENST00000233072 BMP2KQ9NSY1 1161 aaPredicted RBP8.51□□□□□ -1.05
CPS1-201ENST00000233072 PDRG1Q9NUG6 133 aa8.51□□□□□ -1.05
CPS1-201ENST00000233072 NSD3Q9BZ95 1437 aa8.51□□□□□ -1.05
CPS1-201ENST00000233072 NFE2L2Q16236 605 aa8.51□□□□□ -1.05
CPS1-201ENST00000233072 LEKR1Q6ZMV7 388 aa8.51□□□□□ -1.05
CPS1-201ENST00000233072 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
CPS1-201ENST00000233072 ITSN2Q9NZM3 1697 aa8.51□□□□□ -1.05
CPS1-201ENST00000233072 LRPPRCP42704 1394 aaKnown RBP8.51□□□□□ -1.05
CPS1-201ENST00000233072 EIF3JO75822 258 aaKnown RBP8.51□□□□□ -1.05
CPS1-201ENST00000233072 PKNOX2Q96KN3 472 aa8.51□□□□□ -1.05
CPS1-201ENST00000233072 ZNF652Q9Y2D9 606 aa8.51□□□□□ -1.05
CPS1-201ENST00000233072 PATL2C9JE40 543 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms