RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
PTK7-202ENST00000230419 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
PTK7-202ENST00000230419 GLIPR1L2Q4G1C9 344 aa20.46■□□□□ 0.87
PTK7-202ENST00000230419 NUTM1Q86Y26 1132 aa20.46■□□□□ 0.87
PTK7-202ENST00000230419 JARID2Q92833 1246 aaPredicted RBP20.46■□□□□ 0.87
PTK7-202ENST00000230419 CCDC30Q5VVM6 783 aa20.45■□□□□ 0.86
PTK7-202ENST00000230419 RNF214Q8ND24 703 aa20.45■□□□□ 0.86
PTK7-202ENST00000230419 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
PTK7-202ENST00000230419 MAST1Q9Y2H9 1570 aa20.45■□□□□ 0.86
PTK7-202ENST00000230419 MPNDQ8N594 471 aa20.45■□□□□ 0.86
PTK7-202ENST00000230419 EIF4A2Q14240 407 aaKnown RBP20.44■□□□□ 0.86
PTK7-202ENST00000230419 MEIS3Q99687 375 aa20.44■□□□□ 0.86
PTK7-202ENST00000230419 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
PTK7-202ENST00000230419 POLR3AO14802 1390 aaPredicted RBP20.44■□□□□ 0.86
PTK7-202ENST00000230419 RIC3Q7Z5B4 369 aa20.44■□□□□ 0.86
PTK7-202ENST00000230419 GNAI2P04899 355 aa20.44■□□□□ 0.86
PTK7-202ENST00000230419 STRN4Q9NRL3 753 aa20.44■□□□□ 0.86
PTK7-202ENST00000230419 NINLQ9Y2I6 1382 aa20.43■□□□□ 0.86
PTK7-202ENST00000230419 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
PTK7-202ENST00000230419 PTPRTO14522 1441 aa20.43■□□□□ 0.86
PTK7-202ENST00000230419 DTNBO60941 627 aa20.42■□□□□ 0.86
PTK7-202ENST00000230419 FAM177BA6PVY3 158 aa20.42■□□□□ 0.86
PTK7-202ENST00000230419 EVA1CP58658 441 aa20.42■□□□□ 0.86
PTK7-202ENST00000230419 VPS37CA5D8V6 355 aaPredicted RBP20.42■□□□□ 0.86
PTK7-202ENST00000230419 PIP4K2AP48426 406 aaPredicted RBP20.42■□□□□ 0.86
PTK7-202ENST00000230419 CCDC85AQ96PX6 553 aaPredicted RBP20.42■□□□□ 0.86
PTK7-202ENST00000230419 UPF3BQ9BZI7 483 aaKnown RBP20.42■□□□□ 0.86
PTK7-202ENST00000230419 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
PTK7-202ENST00000230419 ATF3P18847 181 aa20.41■□□□□ 0.86
PTK7-202ENST00000230419 CAVIN1Q6NZI2 390 aaKnown RBP20.41■□□□□ 0.86
PTK7-202ENST00000230419 GNAI3P08754 354 aa20.41■□□□□ 0.86
PTK7-202ENST00000230419 G3BP1Q13283 466 aaKnown RBP eCLIP20.41■□□□□ 0.862e-11■□□□□ 8.4
PTK7-202ENST00000230419 CHMP4AQ9BY43 222 aa20.41■□□□□ 0.86
PTK7-202ENST00000230419 CHD1O14646 1710 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 TTC21BQ7Z4L5 1316 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 PPIP5K1Q6PFW1 1433 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 VAMP4O75379 141 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 MCM4P33991 863 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 CCDC27Q2M243 656 aa20.4■□□□□ 0.86
PTK7-202ENST00000230419 PIK3C2GO75747 1445 aa20.39■□□□□ 0.86
PTK7-202ENST00000230419 PRPF40AO75400 957 aaKnown RBP20.39■□□□□ 0.85
PTK7-202ENST00000230419 LRRC59Q96AG4 307 aaKnown RBP20.39■□□□□ 0.85
PTK7-202ENST00000230419 NEUROD6Q96NK8 337 aa20.39■□□□□ 0.85
PTK7-202ENST00000230419 KDM4AO75164 1064 aa20.39■□□□□ 0.85
PTK7-202ENST00000230419 ANKLE2Q86XL3 938 aa20.39■□□□□ 0.85
PTK7-202ENST00000230419 RIMS2Q9UQ26 1411 aa20.38■□□□□ 0.85
PTK7-202ENST00000230419 YTHDC2Q9H6S0 1430 aaKnown RBP20.37■□□□□ 0.85
PTK7-202ENST00000230419 OTUD7AQ8TE49 926 aaPredicted RBP20.37■□□□□ 0.85
PTK7-202ENST00000230419 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
PTK7-202ENST00000230419 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
PTK7-202ENST00000230419 PTMSP20962 102 aa20.37■□□□□ 0.85
PTK7-202ENST00000230419 SYAP1Q96A49 352 aaPredicted RBP20.37■□□□□ 0.85
PTK7-202ENST00000230419 CHRNA2Q15822 529 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
PTK7-202ENST00000230419 TOMM22Q9NS69 142 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 HDAC5Q9UQL6 1122 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 KDM2BQ8NHM5 1336 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 GNL2Q13823 731 aaKnown RBP20.36■□□□□ 0.85
PTK7-202ENST00000230419 G2E3Q7L622 706 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 LRRFIP2Q9Y608 721 aaKnown RBP20.36■□□□□ 0.85
PTK7-202ENST00000230419 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
PTK7-202ENST00000230419 PHF8Q9UPP1 1060 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 ARHGEF5Q12774 1597 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 KCNA6P17658 529 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 LRRCC1Q9C099 1032 aa20.36■□□□□ 0.85
PTK7-202ENST00000230419 K7ELQ4 463 aaPredicted RBP20.35■□□□□ 0.85
PTK7-202ENST00000230419 TBC1D9Q6ZT07 1266 aa20.35■□□□□ 0.85
PTK7-202ENST00000230419 CLASRPQ8N2M8 674 aaKnown RBP20.35■□□□□ 0.85
PTK7-202ENST00000230419 ALDH1L2Q3SY69 923 aa20.35■□□□□ 0.85
PTK7-202ENST00000230419 ERVK-7P63135 1459 aa20.35■□□□□ 0.85
PTK7-202ENST00000230419 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
PTK7-202ENST00000230419 LTKP29376 864 aa20.34■□□□□ 0.85
PTK7-202ENST00000230419 SKOR2Q2VWA4 1001 aaPredicted RBP20.34■□□□□ 0.85
PTK7-202ENST00000230419 CABLES1Q8TDN4 633 aa20.34■□□□□ 0.85
PTK7-202ENST00000230419 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
PTK7-202ENST00000230419 TULP1O00294 542 aaPredicted RBP20.34■□□□□ 0.85
PTK7-202ENST00000230419 PTCD1O75127 700 aaKnown RBP20.34■□□□□ 0.85
PTK7-202ENST00000230419 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
PTK7-202ENST00000230419 DDX58O95786 925 aaKnown RBP20.34■□□□□ 0.85
PTK7-202ENST00000230419 ZKSCAN1P17029 563 aaPredicted RBP20.34■□□□□ 0.85
PTK7-202ENST00000230419 NUCB2P80303 420 aa20.33■□□□□ 0.85
PTK7-202ENST00000230419 ZMYM3Q14202 1370 aa20.33■□□□□ 0.85
PTK7-202ENST00000230419 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
PTK7-202ENST00000230419 TBC1D32Q96NH3 1257 aa20.33■□□□□ 0.85
PTK7-202ENST00000230419 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.85
PTK7-202ENST00000230419 ABCC11Q96J66 1382 aa20.33■□□□□ 0.84
PTK7-202ENST00000230419 CCT4P50991 539 aaKnown RBP20.33■□□□□ 0.84
PTK7-202ENST00000230419 CWC27Q6UX04 472 aaKnown RBP20.32■□□□□ 0.84
PTK7-202ENST00000230419 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
PTK7-202ENST00000230419 TNRQ92752 1358 aa20.32■□□□□ 0.84
PTK7-202ENST00000230419 MYO5CQ9NQX4 1742 aa20.32■□□□□ 0.84
PTK7-202ENST00000230419 BLMP54132 1417 aaPredicted RBP20.32■□□□□ 0.84
PTK7-202ENST00000230419 RABEP1Q15276 862 aa20.32■□□□□ 0.84
PTK7-202ENST00000230419 ERC2O15083 957 aa20.31■□□□□ 0.84
PTK7-202ENST00000230419 FLIIQ13045 1269 aa20.31■□□□□ 0.84
PTK7-202ENST00000230419 SMC3Q9UQE7 1217 aa20.31■□□□□ 0.84
PTK7-202ENST00000230419 EYA1Q99502 592 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms