RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 TOPAZ1Q8N9V7 1692 aa17.3■□□□□ 0.36
COPS7A-201ENST00000229251 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
COPS7A-201ENST00000229251 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
COPS7A-201ENST00000229251 TNS1Q9HBL0 1735 aaKnown RBP17.29■□□□□ 0.36
COPS7A-201ENST00000229251 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
COPS7A-201ENST00000229251 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
COPS7A-201ENST00000229251 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
COPS7A-201ENST00000229251 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
COPS7A-201ENST00000229251 EDC4Q6P2E9 1401 aaKnown RBP17.28■□□□□ 0.36
COPS7A-201ENST00000229251 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
COPS7A-201ENST00000229251 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
COPS7A-201ENST00000229251 RGPD8O14715 1765 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-201ENST00000229251 PPIP5K1Q6PFW1 1433 aa17.26■□□□□ 0.35
COPS7A-201ENST00000229251 MTHFSP49914 203 aa17.26■□□□□ 0.35
COPS7A-201ENST00000229251 IRX6P78412 446 aaPredicted RBP17.26■□□□□ 0.35
COPS7A-201ENST00000229251 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
COPS7A-201ENST00000229251 FYB1O15117 783 aa17.25■□□□□ 0.35
COPS7A-201ENST00000229251 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
COPS7A-201ENST00000229251 PHF8Q9UPP1 1060 aa17.25■□□□□ 0.35
COPS7A-201ENST00000229251 COL3A1P02461 1466 aaPredicted RBP17.25■□□□□ 0.35
COPS7A-201ENST00000229251 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
COPS7A-201ENST00000229251 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
COPS7A-201ENST00000229251 SALL2Q9Y467 1007 aaPredicted RBP17.24■□□□□ 0.35
COPS7A-201ENST00000229251 COL14A1Q05707 1796 aaKnown RBP17.24■□□□□ 0.35
COPS7A-201ENST00000229251 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
COPS7A-201ENST00000229251 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
COPS7A-201ENST00000229251 CCDC61Q9Y6R9 512 aa17.23■□□□□ 0.35
COPS7A-201ENST00000229251 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
COPS7A-201ENST00000229251 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
COPS7A-201ENST00000229251 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
COPS7A-201ENST00000229251 EZH2Q15910 746 aaKnown RBP17.22■□□□□ 0.35
COPS7A-201ENST00000229251 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
COPS7A-201ENST00000229251 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.35
COPS7A-201ENST00000229251 BTG4Q9NY30 223 aa17.21■□□□□ 0.35
COPS7A-201ENST00000229251 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
COPS7A-201ENST00000229251 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
COPS7A-201ENST00000229251 APAF1O14727 1248 aa17.21■□□□□ 0.35
COPS7A-201ENST00000229251 DUSP27Q5VZP5 1158 aa17.21■□□□□ 0.35
COPS7A-201ENST00000229251 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.34
COPS7A-201ENST00000229251 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-201ENST00000229251 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
COPS7A-201ENST00000229251 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
COPS7A-201ENST00000229251 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-201ENST00000229251 E9PSI1 815 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
COPS7A-201ENST00000229251 RREB1Q92766 1687 aa17.18■□□□□ 0.34
COPS7A-201ENST00000229251 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
COPS7A-201ENST00000229251 TRPM3Q9HCF6 1732 aaPredicted RBP17.17■□□□□ 0.34
COPS7A-201ENST00000229251 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
COPS7A-201ENST00000229251 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
COPS7A-201ENST00000229251 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
COPS7A-201ENST00000229251 NUP188Q5SRE5 1749 aa17.15■□□□□ 0.34
COPS7A-201ENST00000229251 TRIM37O94972 964 aa17.15■□□□□ 0.34
COPS7A-201ENST00000229251 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
COPS7A-201ENST00000229251 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
COPS7A-201ENST00000229251 PLEKHG3A1L390 1219 aa17.14■□□□□ 0.33
COPS7A-201ENST00000229251 WDR63Q8IWG1 891 aa17.14■□□□□ 0.33
COPS7A-201ENST00000229251 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
COPS7A-201ENST00000229251 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
COPS7A-201ENST00000229251 PRR36Q9H6K5 1346 aa17.13■□□□□ 0.33
COPS7A-201ENST00000229251 APBA3O96018 575 aa17.13■□□□□ 0.33
COPS7A-201ENST00000229251 TSHZ2Q9NRE2 1034 aa17.13■□□□□ 0.33
COPS7A-201ENST00000229251 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
COPS7A-201ENST00000229251 SPON1Q9HCB6 807 aa17.13■□□□□ 0.33
COPS7A-201ENST00000229251 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-201ENST00000229251 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
COPS7A-201ENST00000229251 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-201ENST00000229251 CRYBG1Q9Y4K1 1723 aa17.12■□□□□ 0.33
COPS7A-201ENST00000229251 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
COPS7A-201ENST00000229251 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
COPS7A-201ENST00000229251 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
COPS7A-201ENST00000229251 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
COPS7A-201ENST00000229251 USP6P35125 1406 aa17.1■□□□□ 0.33
COPS7A-201ENST00000229251 SPATA31A1Q5TZJ5 1347 aa17.1■□□□□ 0.33
COPS7A-201ENST00000229251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.33
COPS7A-201ENST00000229251 KCNQ2O43526 872 aa17.09■□□□□ 0.33
COPS7A-201ENST00000229251 COG3Q96JB2 828 aa17.09■□□□□ 0.33
COPS7A-201ENST00000229251 PRDM11Q9NQV5 511 aa17.09■□□□□ 0.33
COPS7A-201ENST00000229251 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
COPS7A-201ENST00000229251 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.33
COPS7A-201ENST00000229251 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.33
COPS7A-201ENST00000229251 PLEKHF1Q96S99 279 aa17.08■□□□□ 0.32
COPS7A-201ENST00000229251 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
COPS7A-201ENST00000229251 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
COPS7A-201ENST00000229251 TTC21AQ8NDW8 1320 aa17.06■□□□□ 0.32
COPS7A-201ENST00000229251 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
COPS7A-201ENST00000229251 FCHSD2O94868 740 aa17.06■□□□□ 0.32
COPS7A-201ENST00000229251 CAMTA1Q9Y6Y1 1673 aa17.05■□□□□ 0.32
COPS7A-201ENST00000229251 NME9Q86XW9 330 aa17.05■□□□□ 0.32
COPS7A-201ENST00000229251 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-201ENST00000229251 ACEP12821 1306 aa17.05■□□□□ 0.32
COPS7A-201ENST00000229251 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
COPS7A-201ENST00000229251 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
COPS7A-201ENST00000229251 IL16Q14005 1332 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms