RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 TSR2Q969E8 191 aaKnown RBP15.05■□□□□ -0
TNFAIP1-201ENST00000226225 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
TNFAIP1-201ENST00000226225 DCTN1Q14203 1278 aa15.04■□□□□ -0
TNFAIP1-201ENST00000226225 CHRNA2Q15822 529 aa15.04■□□□□ -0
TNFAIP1-201ENST00000226225 RTF1Q92541 710 aaKnown RBP15.04■□□□□ -0
TNFAIP1-201ENST00000226225 NKTRP30414 1462 aaKnown RBP15.04■□□□□ -0
TNFAIP1-201ENST00000226225 NPHP3Q7Z494 1330 aa15.04■□□□□ -0
TNFAIP1-201ENST00000226225 IL13P35225 146 aa15.04■□□□□ -0
TNFAIP1-201ENST00000226225 KCNH5Q8NCM2 988 aa15.04■□□□□ -0
TNFAIP1-201ENST00000226225 NLRP2Q9NX02 1062 aa15.03■□□□□ -0
TNFAIP1-201ENST00000226225 SETD1AO15047 1707 aaKnown RBP15.02■□□□□ -0
TNFAIP1-201ENST00000226225 MYH16Q9H6N6 1097 aa15.02■□□□□ -0
TNFAIP1-201ENST00000226225 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
TNFAIP1-201ENST00000226225 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
TNFAIP1-201ENST00000226225 TCERG1O14776 1098 aaKnown RBP15.01□□□□□ -0.01
TNFAIP1-201ENST00000226225 SLFN5Q08AF3 891 aa15.01□□□□□ -0.01
TNFAIP1-201ENST00000226225 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
TNFAIP1-201ENST00000226225 BACH2Q9BYV9 841 aa15□□□□□ -0.01
TNFAIP1-201ENST00000226225 HOXC9P31274 260 aa15□□□□□ -0.01
TNFAIP1-201ENST00000226225 GOLGA6L2Q8N9W4 650 aaPredicted RBP15□□□□□ -0.01
TNFAIP1-201ENST00000226225 USP35Q9P2H5 1018 aa15□□□□□ -0.01
TNFAIP1-201ENST00000226225 CDC42BPGQ6DT37 1551 aa15□□□□□ -0.01
TNFAIP1-201ENST00000226225 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
TNFAIP1-201ENST00000226225 EYA1Q99502 592 aa15□□□□□ -0.01
TNFAIP1-201ENST00000226225 LMTK3Q96Q04 1460 aa14.99□□□□□ -0.01
TNFAIP1-201ENST00000226225 RGS3P49796 1198 aa14.99□□□□□ -0.01
TNFAIP1-201ENST00000226225 RSPH6AQ9H0K4 717 aa14.99□□□□□ -0.01
TNFAIP1-201ENST00000226225 BRINP3Q76B58 766 aa14.99□□□□□ -0.01
TNFAIP1-201ENST00000226225 PRDM11Q9NQV5 511 aa14.99□□□□□ -0.01
TNFAIP1-201ENST00000226225 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
TNFAIP1-201ENST00000226225 BLMP54132 1417 aaPredicted RBP14.99□□□□□ -0.01
TNFAIP1-201ENST00000226225 NFE2L2Q16236 605 aa14.98□□□□□ -0.01
TNFAIP1-201ENST00000226225 MCM10Q7L590 875 aa14.98□□□□□ -0.01
TNFAIP1-201ENST00000226225 CRBNQ96SW2 442 aa14.98□□□□□ -0.01
TNFAIP1-201ENST00000226225 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
TNFAIP1-201ENST00000226225 FLT4P35916 1363 aa14.98□□□□□ -0.01
TNFAIP1-201ENST00000226225 C1orf167Q5SNV9 1468 aa14.98□□□□□ -0.01
TNFAIP1-201ENST00000226225 STRN4Q9NRL3 753 aa14.98□□□□□ -0.01
TNFAIP1-201ENST00000226225 BCAR3O75815 825 aa14.97□□□□□ -0.01
TNFAIP1-201ENST00000226225 NFKBIBQ15653 356 aa14.97□□□□□ -0.01
TNFAIP1-201ENST00000226225 GSE1Q14687 1217 aa14.97□□□□□ -0.01
TNFAIP1-201ENST00000226225 AATKQ6ZMQ8 1374 aa14.96□□□□□ -0.01
TNFAIP1-201ENST00000226225 A0A0G2JS52 829 aa14.96□□□□□ -0.01
TNFAIP1-201ENST00000226225 EVA1CP58658 441 aa14.96□□□□□ -0.01
TNFAIP1-201ENST00000226225 EXOSC9Q06265 439 aaKnown RBP14.96□□□□□ -0.01
TNFAIP1-201ENST00000226225 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
TNFAIP1-201ENST00000226225 MIS18AQ9NYP9 233 aa14.96□□□□□ -0.02
TNFAIP1-201ENST00000226225 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
TNFAIP1-201ENST00000226225 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
TNFAIP1-201ENST00000226225 ZNF142P52746 1687 aaPredicted RBP14.95□□□□□ -0.02
TNFAIP1-201ENST00000226225 ANKRD24Q8TF21 1146 aa14.95□□□□□ -0.02
TNFAIP1-201ENST00000226225 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 CALD1Q05682 793 aaKnown RBP14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 C20orf194Q5TEA3 1177 aa14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 IP6K1Q92551 441 aa14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 KNDC1Q76NI1 1749 aa14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 RNF123Q5XPI4 1314 aa14.94□□□□□ -0.02
TNFAIP1-201ENST00000226225 TRIM35Q9UPQ4 493 aa14.93□□□□□ -0.02
TNFAIP1-201ENST00000226225 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 RAPGEF4Q8WZA2 1011 aa14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 PNPLA6Q8IY17 1366 aa14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 UBAP1LF5GYI3 381 aa14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 OVOS2A0A0J9YW53 1432 aa14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 OVOS2Q6IE36 1432 aa14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 XRN1Q8IZH2 1706 aaKnown RBP14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 MTHFSDQ2M296 383 aaKnown RBP14.92□□□□□ -0.02
TNFAIP1-201ENST00000226225 FRAT2O75474 233 aaPredicted RBP14.91□□□□□ -0.02
TNFAIP1-201ENST00000226225 ADAMTS2O95450 1211 aa14.91□□□□□ -0.02
TNFAIP1-201ENST00000226225 FTSJ3Q8IY81 847 aaKnown RBP14.91□□□□□ -0.02
TNFAIP1-201ENST00000226225 TOM1L2Q6ZVM7 507 aa14.91□□□□□ -0.02
TNFAIP1-201ENST00000226225 AXIN2Q9Y2T1 843 aa14.91□□□□□ -0.02
TNFAIP1-201ENST00000226225 ARHGEF25Q86VW2 580 aa14.9□□□□□ -0.02
TNFAIP1-201ENST00000226225 GAS2L2Q8NHY3 880 aa14.9□□□□□ -0.02
TNFAIP1-201ENST00000226225 NECTIN2Q92692 538 aa14.9□□□□□ -0.02
TNFAIP1-201ENST00000226225 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
TNFAIP1-201ENST00000226225 GNAI1P63096 354 aa14.9□□□□□ -0.02
TNFAIP1-201ENST00000226225 C1orf141Q5JVX7 400 aa14.9□□□□□ -0.02
TNFAIP1-201ENST00000226225 CHD2O14647 1828 aaKnown RBP14.9□□□□□ -0.02
TNFAIP1-201ENST00000226225 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
TNFAIP1-201ENST00000226225 ADGRB2O60241 1585 aa14.89□□□□□ -0.03
TNFAIP1-201ENST00000226225 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
TNFAIP1-201ENST00000226225 ZNF521Q96K83 1311 aa14.89□□□□□ -0.03
TNFAIP1-201ENST00000226225 TSPYL4Q9UJ04 414 aa14.89□□□□□ -0.03
TNFAIP1-201ENST00000226225 MST1RQ04912 1400 aa14.89□□□□□ -0.03
TNFAIP1-201ENST00000226225 USP31Q70CQ4 1352 aa14.89□□□□□ -0.03
TNFAIP1-201ENST00000226225 RGPD8O14715 1765 aaPredicted RBP14.88□□□□□ -0.03
TNFAIP1-201ENST00000226225 TEFQ10587 303 aa14.88□□□□□ -0.03
TNFAIP1-201ENST00000226225 SSH2Q76I76 1423 aa14.88□□□□□ -0.03
TNFAIP1-201ENST00000226225 TOM1O60784 492 aa14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 CCDC27Q2M243 656 aa14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 COG6Q9Y2V7 657 aa14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 INSRP06213 1382 aa14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 MPRIPQ6WCQ1 1025 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms