RNA–Protein interactions for RNA: ENST00000222747.7

TSPAN12-201, Transcript of tetraspanin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN12, Length 2,798 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN12-201ENST00000222747 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
TSPAN12-201ENST00000222747 HMOX1P09601 288 aa18.38■□□□□ 0.53
TSPAN12-201ENST00000222747 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
TSPAN12-201ENST00000222747 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
TSPAN12-201ENST00000222747 NME9Q86XW9 330 aa18.37■□□□□ 0.53
TSPAN12-201ENST00000222747 WASLO00401 505 aaPredicted RBP18.37■□□□□ 0.53
TSPAN12-201ENST00000222747 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
TSPAN12-201ENST00000222747 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
TSPAN12-201ENST00000222747 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
TSPAN12-201ENST00000222747 DDX11L8A8MPP1 907 aa18.36■□□□□ 0.53
TSPAN12-201ENST00000222747 THUMPD2Q9BTF0 503 aaKnown RBP18.36■□□□□ 0.53
TSPAN12-201ENST00000222747 TXNDC2Q86VQ3 553 aa18.36■□□□□ 0.53
TSPAN12-201ENST00000222747 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
TSPAN12-201ENST00000222747 EDC4Q6P2E9 1401 aaKnown RBP18.35■□□□□ 0.53
TSPAN12-201ENST00000222747 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
TSPAN12-201ENST00000222747 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
TSPAN12-201ENST00000222747 ESPNB1AK53 854 aa18.34■□□□□ 0.53
TSPAN12-201ENST00000222747 HSP90AA2PQ14568 343 aaPredicted RBP18.34■□□□□ 0.53
TSPAN12-201ENST00000222747 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
TSPAN12-201ENST00000222747 IL13P35225 146 aa18.34■□□□□ 0.53
TSPAN12-201ENST00000222747 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
TSPAN12-201ENST00000222747 SMC5Q8IY18 1101 aa18.33■□□□□ 0.53
TSPAN12-201ENST00000222747 IPO8O15397 1037 aaKnown RBP18.33■□□□□ 0.52
TSPAN12-201ENST00000222747 GLIPR1L2Q4G1C9 344 aa18.33■□□□□ 0.52
TSPAN12-201ENST00000222747 CPS1P31327 1500 aa18.33■□□□□ 0.52
TSPAN12-201ENST00000222747 NCOA3Q9Y6Q9 1424 aa18.33■□□□□ 0.52
TSPAN12-201ENST00000222747 GAS2L3Q86XJ1 694 aa18.32■□□□□ 0.52
TSPAN12-201ENST00000222747 TNPO1Q92973 898 aaKnown RBP18.32■□□□□ 0.52
TSPAN12-201ENST00000222747 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
TSPAN12-201ENST00000222747 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
TSPAN12-201ENST00000222747 DDIT3P35638 169 aa18.32■□□□□ 0.52
TSPAN12-201ENST00000222747 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
TSPAN12-201ENST00000222747 PKNOX2Q96KN3 472 aa18.31■□□□□ 0.52
TSPAN12-201ENST00000222747 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
TSPAN12-201ENST00000222747 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
TSPAN12-201ENST00000222747 VAMP4O75379 141 aa18.3■□□□□ 0.52
TSPAN12-201ENST00000222747 RRS1Q15050 365 aaKnown RBP18.3■□□□□ 0.52
TSPAN12-201ENST00000222747 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
TSPAN12-201ENST00000222747 KNDC1Q76NI1 1749 aa18.3■□□□□ 0.52
TSPAN12-201ENST00000222747 BRPF1P55201 1214 aaPredicted RBP18.3■□□□□ 0.52
TSPAN12-201ENST00000222747 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
TSPAN12-201ENST00000222747 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
TSPAN12-201ENST00000222747 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
TSPAN12-201ENST00000222747 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
TSPAN12-201ENST00000222747 RRP9O43818 475 aaKnown RBP18.28■□□□□ 0.52
TSPAN12-201ENST00000222747 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
TSPAN12-201ENST00000222747 TRIM44Q96DX7 344 aaPredicted RBP18.28■□□□□ 0.52
TSPAN12-201ENST00000222747 C3P01024 1663 aa18.28■□□□□ 0.52
TSPAN12-201ENST00000222747 ZNF428Q96B54 188 aa18.28■□□□□ 0.52
TSPAN12-201ENST00000222747 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
TSPAN12-201ENST00000222747 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
TSPAN12-201ENST00000222747 ZNF853P0CG23 659 aa18.27■□□□□ 0.52
TSPAN12-201ENST00000222747 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
TSPAN12-201ENST00000222747 LNPKQ9C0E8 428 aa18.27■□□□□ 0.52
TSPAN12-201ENST00000222747 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
TSPAN12-201ENST00000222747 TECPR2O15040 1411 aa18.27■□□□□ 0.52
TSPAN12-201ENST00000222747 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.52
TSPAN12-201ENST00000222747 COG3Q96JB2 828 aa18.27■□□□□ 0.51
TSPAN12-201ENST00000222747 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
TSPAN12-201ENST00000222747 IFT57Q9NWB7 429 aa18.26■□□□□ 0.51
TSPAN12-201ENST00000222747 GNAI1P63096 354 aa18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 ISY1Q9ULR0 285 aaKnown RBP18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 NUCB1Q02818 461 aa18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 SNX21Q969T3 373 aa18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 KIF13AQ9H1H9 1805 aa18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 ZBTB7BO15156 539 aaPredicted RBP18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 CD2BP2O95400 341 aaKnown RBP18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 RAB3GAP1Q15042 981 aa18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 GBP4Q96PP9 640 aa18.25■□□□□ 0.51
TSPAN12-201ENST00000222747 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
TSPAN12-201ENST00000222747 SIRT1Q96EB6 747 aa18.24■□□□□ 0.51
TSPAN12-201ENST00000222747 ZMYND15Q9H091 742 aa18.24■□□□□ 0.51
TSPAN12-201ENST00000222747 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
TSPAN12-201ENST00000222747 PTCH1Q13635 1447 aa18.24■□□□□ 0.51
TSPAN12-201ENST00000222747 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
TSPAN12-201ENST00000222747 C1orf115Q9H7X2 142 aa18.23■□□□□ 0.51
TSPAN12-201ENST00000222747 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
TSPAN12-201ENST00000222747 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
TSPAN12-201ENST00000222747 UBR1Q8IWV7 1749 aa18.22■□□□□ 0.51
TSPAN12-201ENST00000222747 DCTN1Q14203 1278 aa18.22■□□□□ 0.51
TSPAN12-201ENST00000222747 ARHGAP45Q92619 1136 aa18.22■□□□□ 0.51
TSPAN12-201ENST00000222747 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
TSPAN12-201ENST00000222747 TNRQ92752 1358 aa18.21■□□□□ 0.51
TSPAN12-201ENST00000222747 TWISTNBQ3B726 338 aaPredicted RBP18.21■□□□□ 0.51
TSPAN12-201ENST00000222747 KIF2CQ99661 725 aa18.21■□□□□ 0.51
TSPAN12-201ENST00000222747 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
TSPAN12-201ENST00000222747 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
TSPAN12-201ENST00000222747 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
TSPAN12-201ENST00000222747 TMEM2Q9UHN6 1383 aa18.2■□□□□ 0.5
TSPAN12-201ENST00000222747 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
TSPAN12-201ENST00000222747 AEBP1Q8IUX7 1158 aa18.2■□□□□ 0.5
TSPAN12-201ENST00000222747 ABCC4O15439 1325 aa18.2■□□□□ 0.5
TSPAN12-201ENST00000222747 SSFA2P28290 1259 aa18.19■□□□□ 0.5
TSPAN12-201ENST00000222747 HDGFP51858 240 aaKnown RBP18.19■□□□□ 0.5
TSPAN12-201ENST00000222747 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
TSPAN12-201ENST00000222747 SIRT2Q8IXJ6 389 aa18.19■□□□□ 0.5
TSPAN12-201ENST00000222747 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
TSPAN12-201ENST00000222747 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
TSPAN12-201ENST00000222747 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms