RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 TCP11L2Q8N4U5 519 aa20.09■□□□□ 0.81
SF3A2-201ENST00000221494 CHD2O14647 1828 aaKnown RBP20.09■□□□□ 0.81
SF3A2-201ENST00000221494 HDAC1Q13547 482 aaPredicted RBP20.08■□□□□ 0.81
SF3A2-201ENST00000221494 NCOA3Q9Y6Q9 1424 aa20.08■□□□□ 0.8
SF3A2-201ENST00000221494 ZNF692Q9BU19 519 aaPredicted RBP20.08■□□□□ 0.8
SF3A2-201ENST00000221494 CDC42BPGQ6DT37 1551 aa20.07■□□□□ 0.8
SF3A2-201ENST00000221494 DDX11L8A8MPP1 907 aa20.07■□□□□ 0.8
SF3A2-201ENST00000221494 EDC4Q6P2E9 1401 aaKnown RBP20.07■□□□□ 0.8
SF3A2-201ENST00000221494 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
SF3A2-201ENST00000221494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.06■□□□□ 0.8
SF3A2-201ENST00000221494 RLBP1P12271 317 aa20.06■□□□□ 0.8
SF3A2-201ENST00000221494 PTMSP20962 102 aa20.06■□□□□ 0.8
SF3A2-201ENST00000221494 MRE11P49959 708 aa20.06■□□□□ 0.8
SF3A2-201ENST00000221494 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
SF3A2-201ENST00000221494 CLCN1P35523 988 aa20.05■□□□□ 0.8
SF3A2-201ENST00000221494 ACEP12821 1306 aa20.05■□□□□ 0.8
SF3A2-201ENST00000221494 LMTK3Q96Q04 1460 aa20.04■□□□□ 0.8
SF3A2-201ENST00000221494 MTHFSP49914 203 aa20.04■□□□□ 0.8
SF3A2-201ENST00000221494 C22orf23Q9BZE7 217 aa20.04■□□□□ 0.8
SF3A2-201ENST00000221494 RRAGDQ9NQL2 400 aaPredicted RBP20.04■□□□□ 0.8
SF3A2-201ENST00000221494 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.8
SF3A2-201ENST00000221494 DZIP1LQ8IYY4 767 aaKnown RBP20.03■□□□□ 0.8
SF3A2-201ENST00000221494 CIZ1Q9ULV3 898 aaPredicted RBP20.03■□□□□ 0.8
SF3A2-201ENST00000221494 ANKARQ7Z5J8 1434 aa20.02■□□□□ 0.8
SF3A2-201ENST00000221494 PDIA4P13667 645 aaKnown RBP20.02■□□□□ 0.8
SF3A2-201ENST00000221494 IL16Q14005 1332 aa20.02■□□□□ 0.79
SF3A2-201ENST00000221494 TOPAZ1Q8N9V7 1692 aa20.01■□□□□ 0.79
SF3A2-201ENST00000221494 SNX21Q969T3 373 aa20.01■□□□□ 0.79
SF3A2-201ENST00000221494 DDX19BQ9UMR2 479 aa20.01■□□□□ 0.79
SF3A2-201ENST00000221494 NWD1Q149M9 1564 aa20.01■□□□□ 0.79
SF3A2-201ENST00000221494 ANKRD26Q9UPS8 1709 aa20.01■□□□□ 0.79
SF3A2-201ENST00000221494 NME9Q86XW9 330 aa20.01■□□□□ 0.79
SF3A2-201ENST00000221494 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
SF3A2-201ENST00000221494 TRAK2O60296 914 aa19.99■□□□□ 0.79
SF3A2-201ENST00000221494 HSCBQ8IWL3 235 aa19.99■□□□□ 0.79
SF3A2-201ENST00000221494 SMC5Q8IY18 1101 aa19.99■□□□□ 0.79
SF3A2-201ENST00000221494 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
SF3A2-201ENST00000221494 TTC21BQ7Z4L5 1316 aa19.98■□□□□ 0.79
SF3A2-201ENST00000221494 RBM25P49756 843 aaKnown RBP19.98■□□□□ 0.79
SF3A2-201ENST00000221494 ZRANB1Q9UGI0 708 aa19.98■□□□□ 0.79
SF3A2-201ENST00000221494 USP6P35125 1406 aa19.98■□□□□ 0.79
SF3A2-201ENST00000221494 DDIT3P35638 169 aa19.97■□□□□ 0.79
SF3A2-201ENST00000221494 SSH2Q76I76 1423 aa19.97■□□□□ 0.79
SF3A2-201ENST00000221494 PROSER2Q86WR7 435 aaPredicted RBP19.97■□□□□ 0.79
SF3A2-201ENST00000221494 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
SF3A2-201ENST00000221494 PNNQ9H307 717 aaKnown RBP19.96■□□□□ 0.79
SF3A2-201ENST00000221494 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
SF3A2-201ENST00000221494 KIF16BQ96L93 1317 aa19.96■□□□□ 0.79
SF3A2-201ENST00000221494 SKOR2Q2VWA4 1001 aaPredicted RBP19.95■□□□□ 0.78
SF3A2-201ENST00000221494 NGDNQ8NEJ9 315 aaKnown RBP19.95■□□□□ 0.78
SF3A2-201ENST00000221494 AKAP12Q02952 1782 aa19.95■□□□□ 0.78
SF3A2-201ENST00000221494 FMN2Q9NZ56 1722 aa19.95■□□□□ 0.78
SF3A2-201ENST00000221494 C14orf37Q86TY3 774 aa19.94■□□□□ 0.78
SF3A2-201ENST00000221494 PDE4CQ08493 712 aa19.94■□□□□ 0.78
SF3A2-201ENST00000221494 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
SF3A2-201ENST00000221494 COG3Q96JB2 828 aa19.94■□□□□ 0.78
SF3A2-201ENST00000221494 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
SF3A2-201ENST00000221494 FBLN1P23142 703 aa19.93■□□□□ 0.78
SF3A2-201ENST00000221494 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
SF3A2-201ENST00000221494 TNNQ9UQP3 1299 aa19.93■□□□□ 0.78
SF3A2-201ENST00000221494 KIF20BQ96Q89 1820 aa19.93■□□□□ 0.78
SF3A2-201ENST00000221494 ATF7IPQ6VMQ6 1270 aa19.92■□□□□ 0.78
SF3A2-201ENST00000221494 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
SF3A2-201ENST00000221494 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
SF3A2-201ENST00000221494 ITSN1Q15811 1721 aa19.92■□□□□ 0.78
SF3A2-201ENST00000221494 PNPLA6Q8IY17 1366 aa19.92■□□□□ 0.78
SF3A2-201ENST00000221494 ZNF428Q96B54 188 aa19.92■□□□□ 0.78
SF3A2-201ENST00000221494 GBP4Q96PP9 640 aa19.92■□□□□ 0.78
SF3A2-201ENST00000221494 CHMP4BQ9H444 224 aaKnown RBP19.92■□□□□ 0.78
SF3A2-201ENST00000221494 GRPEL1Q9HAV7 217 aa19.92■□□□□ 0.78
SF3A2-201ENST00000221494 NRKQ7Z2Y5 1582 aa19.91■□□□□ 0.78
SF3A2-201ENST00000221494 IPO8O15397 1037 aaKnown RBP19.91■□□□□ 0.78
SF3A2-201ENST00000221494 MFAP1P55081 439 aaKnown RBP19.91■□□□□ 0.78
SF3A2-201ENST00000221494 C19orf44Q9H6X5 657 aa19.91■□□□□ 0.78
SF3A2-201ENST00000221494 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
SF3A2-201ENST00000221494 AATKQ6ZMQ8 1374 aa19.9■□□□□ 0.78
SF3A2-201ENST00000221494 TTC21AQ8NDW8 1320 aa19.9■□□□□ 0.78
SF3A2-201ENST00000221494 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
SF3A2-201ENST00000221494 TRIM27P14373 513 aa19.89■□□□□ 0.77
SF3A2-201ENST00000221494 BRPF1P55201 1214 aaPredicted RBP19.89■□□□□ 0.77
SF3A2-201ENST00000221494 BCL2L13Q9BXK5 485 aa19.89■□□□□ 0.77
SF3A2-201ENST00000221494 TMEM94Q12767 1356 aa19.89■□□□□ 0.77
SF3A2-201ENST00000221494 NUCB1Q02818 461 aa19.88■□□□□ 0.77
SF3A2-201ENST00000221494 ALDH1L2Q3SY69 923 aa19.88■□□□□ 0.77
SF3A2-201ENST00000221494 OVOS2A0A0J9YW53 1432 aa19.88■□□□□ 0.77
SF3A2-201ENST00000221494 OVOS2Q6IE36 1432 aa19.88■□□□□ 0.77
SF3A2-201ENST00000221494 RGPD8O14715 1765 aaPredicted RBP19.88■□□□□ 0.77
SF3A2-201ENST00000221494 ZBTB40Q9NUA8 1239 aa19.88■□□□□ 0.77
SF3A2-201ENST00000221494 RRP9O43818 475 aaKnown RBP19.87■□□□□ 0.77
SF3A2-201ENST00000221494 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
SF3A2-201ENST00000221494 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.77
SF3A2-201ENST00000221494 ESCO1Q5FWF5 840 aa19.87■□□□□ 0.77
SF3A2-201ENST00000221494 STRCQ7RTU9 1775 aa19.87■□□□□ 0.77
SF3A2-201ENST00000221494 IBTKQ9P2D0 1353 aaPredicted RBP19.87■□□□□ 0.77
SF3A2-201ENST00000221494 BMP2KLQ5H9B9 411 aa19.86■□□□□ 0.77
SF3A2-201ENST00000221494 PLEKHF1Q96S99 279 aa19.86■□□□□ 0.77
SF3A2-201ENST00000221494 EMILIN1Q9Y6C2 1016 aa19.86■□□□□ 0.77
SF3A2-201ENST00000221494 RAB3GAP1Q15042 981 aa19.85■□□□□ 0.77
SF3A2-201ENST00000221494 CLEC17AQ6ZS10 378 aa19.85■□□□□ 0.77
SF3A2-201ENST00000221494 CFAP44Q96MT7 982 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms