RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 AMOTQ4VCS5 1084 aa11.69□□□□□ -0.54
CCDC113-201ENST00000219299 ZNF428Q96B54 188 aa11.69□□□□□ -0.54
CCDC113-201ENST00000219299 FAM177BA6PVY3 158 aa11.69□□□□□ -0.54
CCDC113-201ENST00000219299 BCAR3O75815 825 aa11.68□□□□□ -0.54
CCDC113-201ENST00000219299 SIRT1Q96EB6 747 aa11.68□□□□□ -0.54
CCDC113-201ENST00000219299 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
CCDC113-201ENST00000219299 ZNF335Q9H4Z2 1342 aaPredicted RBP11.68□□□□□ -0.54
CCDC113-201ENST00000219299 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
CCDC113-201ENST00000219299 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
CCDC113-201ENST00000219299 MYL6BP14649 208 aa11.67□□□□□ -0.54
CCDC113-201ENST00000219299 EIF4A2Q14240 407 aaKnown RBP11.67□□□□□ -0.54
CCDC113-201ENST00000219299 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
CCDC113-201ENST00000219299 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 FAM83GA6ND36 823 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 FRAT2O75474 233 aaPredicted RBP11.66□□□□□ -0.54
CCDC113-201ENST00000219299 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 ROBO2Q9HCK4 1378 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 ASXL1Q8IXJ9 1541 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
CCDC113-201ENST00000219299 FGD1P98174 961 aa11.66□□□□□ -0.54
CCDC113-201ENST00000219299 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
CCDC113-201ENST00000219299 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
CCDC113-201ENST00000219299 TAF7Q15545 349 aaPredicted RBP11.65□□□□□ -0.54
CCDC113-201ENST00000219299 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
CCDC113-201ENST00000219299 CHAF1AQ13111 956 aaPredicted RBP11.65□□□□□ -0.54
CCDC113-201ENST00000219299 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
CCDC113-201ENST00000219299 G3V3G9 751 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 A2ML1A8K2U0 1454 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 IFNL2Q8IZJ0 200 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 TET3O43151 1660 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 NOB1Q9ULX3 412 aaKnown RBP11.64□□□□□ -0.55
CCDC113-201ENST00000219299 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
CCDC113-201ENST00000219299 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
CCDC113-201ENST00000219299 FLT4P35916 1363 aa11.63□□□□□ -0.55
CCDC113-201ENST00000219299 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
CCDC113-201ENST00000219299 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
CCDC113-201ENST00000219299 UBTFL1P0CB47 393 aaPredicted RBP11.63□□□□□ -0.55
CCDC113-201ENST00000219299 GPATCH3Q96I76 525 aa11.63□□□□□ -0.55
CCDC113-201ENST00000219299 EYA1Q99502 592 aa11.63□□□□□ -0.55
CCDC113-201ENST00000219299 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
CCDC113-201ENST00000219299 PARD3Q8TEW0 1356 aa11.62□□□□□ -0.55
CCDC113-201ENST00000219299 PTMSP20962 102 aa11.62□□□□□ -0.55
CCDC113-201ENST00000219299 KIAA1211Q6ZU35 1233 aa11.62□□□□□ -0.55
CCDC113-201ENST00000219299 GLI2P10070 1586 aa11.62□□□□□ -0.55
CCDC113-201ENST00000219299 HOXC9P31274 260 aa11.62□□□□□ -0.55
CCDC113-201ENST00000219299 NAP1L2Q9ULW6 460 aaPredicted RBP11.62□□□□□ -0.55
CCDC113-201ENST00000219299 IQGAP3Q86VI3 1631 aa11.62□□□□□ -0.55
CCDC113-201ENST00000219299 KIF6Q6ZMV9 814 aa11.61□□□□□ -0.55
CCDC113-201ENST00000219299 IP6K1Q92551 441 aa11.61□□□□□ -0.55
CCDC113-201ENST00000219299 ZCRB1Q8TBF4 217 aaKnown RBP11.61□□□□□ -0.55
CCDC113-201ENST00000219299 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
CCDC113-201ENST00000219299 GOLGA6L6A8MZA4 724 aa11.61□□□□□ -0.55
CCDC113-201ENST00000219299 RSPH6AQ9H0K4 717 aa11.6□□□□□ -0.55
CCDC113-201ENST00000219299 MYOM2P54296 1465 aa11.6□□□□□ -0.55
CCDC113-201ENST00000219299 SBNO2Q9Y2G9 1366 aa11.6□□□□□ -0.55
CCDC113-201ENST00000219299 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
CCDC113-201ENST00000219299 CENPQQ7L2Z9 268 aaPredicted RBP11.6□□□□□ -0.55
CCDC113-201ENST00000219299 G3BP1Q13283 466 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC113-201ENST00000219299 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
CCDC113-201ENST00000219299 ATF7IPQ6VMQ6 1270 aa11.6□□□□□ -0.55
CCDC113-201ENST00000219299 STARD3NLO95772 234 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 GNAI3P08754 354 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
CCDC113-201ENST00000219299 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 C1orf115Q9H7X2 142 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 NRDCO43847 1150 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 KIF1BO60333 1816 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 DDB1Q16531 1140 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 PRR36Q9H6K5 1346 aa11.59□□□□□ -0.55
CCDC113-201ENST00000219299 RNF17Q9BXT8 1623 aaKnown RBP11.58□□□□□ -0.56
CCDC113-201ENST00000219299 SSH1Q8WYL5 1049 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 POLR3AO14802 1390 aaPredicted RBP11.58□□□□□ -0.56
CCDC113-201ENST00000219299 KIDINS220Q9ULH0 1771 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 MTHFSDQ2M296 383 aaKnown RBP11.58□□□□□ -0.56
CCDC113-201ENST00000219299 RILPL2Q969X0 211 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 IL2RBP14784 551 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 LNPKQ9C0E8 428 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 INO80Q9ULG1 1556 aaPredicted RBP11.58□□□□□ -0.56
CCDC113-201ENST00000219299 ACSBG1Q96GR2 724 aa11.58□□□□□ -0.56
CCDC113-201ENST00000219299 ABCA6Q8N139 1617 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 UNC13BO14795 1591 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 MCCP23508 829 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 PDE3AQ14432 1141 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 CLTCL1P53675 1640 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 GBP4Q96PP9 640 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 SLC39A6Q13433 755 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 PIK3R4Q99570 1358 aa11.57□□□□□ -0.56
CCDC113-201ENST00000219299 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
CCDC113-201ENST00000219299 IFIT2P09913 472 aaKnown RBP11.56□□□□□ -0.56
CCDC113-201ENST00000219299 FMNL2Q96PY5 1086 aa11.56□□□□□ -0.56
CCDC113-201ENST00000219299 GOLGA6L3A6NEY3 463 aa11.56□□□□□ -0.56
CCDC113-201ENST00000219299 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
CCDC113-201ENST00000219299 ZFYVE9O95405 1425 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms