RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ROBO2Q9HCK4 1378 aa21.71■■□□□ 1.07
USB1-201ENST00000219281 L1TD1Q5T7N2 865 aaKnown RBP21.71■■□□□ 1.07
USB1-201ENST00000219281 CHD1LQ86WJ1 897 aa21.71■■□□□ 1.07
USB1-201ENST00000219281 HSCBQ8IWL3 235 aa21.71■■□□□ 1.07
USB1-201ENST00000219281 HMOX1P09601 288 aa21.7■■□□□ 1.06
USB1-201ENST00000219281 PHACTR3Q96KR7 559 aa21.7■■□□□ 1.06
USB1-201ENST00000219281 PPIP5K1Q6PFW1 1433 aa21.7■■□□□ 1.06
USB1-201ENST00000219281 FAM43AQ8N2R8 423 aa21.69■■□□□ 1.06
USB1-201ENST00000219281 THUMPD2Q9BTF0 503 aaKnown RBP21.69■■□□□ 1.06
USB1-201ENST00000219281 PLEKHG1Q9ULL1 1385 aa21.69■■□□□ 1.06
USB1-201ENST00000219281 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
USB1-201ENST00000219281 CCDC61Q9Y6R9 512 aa21.69■■□□□ 1.06
USB1-201ENST00000219281 KNDC1Q76NI1 1749 aa21.68■■□□□ 1.06
USB1-201ENST00000219281 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
USB1-201ENST00000219281 NFE2L2Q16236 605 aa21.68■■□□□ 1.06
USB1-201ENST00000219281 CPS1P31327 1500 aa21.68■■□□□ 1.06
USB1-201ENST00000219281 BRPF1P55201 1214 aaPredicted RBP21.67■■□□□ 1.06
USB1-201ENST00000219281 SLC26A8Q96RN1 970 aa21.67■■□□□ 1.06
USB1-201ENST00000219281 KIF20BQ96Q89 1820 aa21.67■■□□□ 1.06
USB1-201ENST00000219281 PRR36Q9H6K5 1346 aa21.67■■□□□ 1.06
USB1-201ENST00000219281 CDC42BPGQ6DT37 1551 aa21.67■■□□□ 1.06
USB1-201ENST00000219281 ZBTB7BO15156 539 aaPredicted RBP21.67■■□□□ 1.06
USB1-201ENST00000219281 VAMP4O75379 141 aa21.67■■□□□ 1.06
USB1-201ENST00000219281 MRPL50Q8N5N7 158 aaKnown RBP21.67■■□□□ 1.06
USB1-201ENST00000219281 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
USB1-201ENST00000219281 ARXQ96QS3 562 aa21.67■■□□□ 1.06
USB1-201ENST00000219281 GZF1Q9H116 711 aaPredicted RBP21.66■■□□□ 1.06
USB1-201ENST00000219281 C1orf115Q9H7X2 142 aa21.66■■□□□ 1.06
USB1-201ENST00000219281 ZRANB1Q9UGI0 708 aa21.66■■□□□ 1.06
USB1-201ENST00000219281 RBM25P49756 843 aaKnown RBP21.66■■□□□ 1.06
USB1-201ENST00000219281 ANKRD45Q5TZF3 282 aa21.66■■□□□ 1.06
USB1-201ENST00000219281 NME9Q86XW9 330 aa21.66■■□□□ 1.06
USB1-201ENST00000219281 TSPYL6Q8N831 410 aa21.66■■□□□ 1.06
USB1-201ENST00000219281 C3P01024 1663 aa21.65■■□□□ 1.06
USB1-201ENST00000219281 ELL2O00472 640 aaPredicted RBP21.64■■□□□ 1.06
USB1-201ENST00000219281 EDC4Q6P2E9 1401 aaKnown RBP21.64■■□□□ 1.06
USB1-201ENST00000219281 ZNF692Q9BU19 519 aaPredicted RBP21.64■■□□□ 1.05
USB1-201ENST00000219281 EMILIN1Q9Y6C2 1016 aa21.64■■□□□ 1.05
USB1-201ENST00000219281 PTPRUQ92729 1446 aa21.63■■□□□ 1.05
USB1-201ENST00000219281 GOLGA6L3A6NEY3 463 aa21.63■■□□□ 1.05
USB1-201ENST00000219281 TRAK2O60296 914 aa21.63■■□□□ 1.05
USB1-201ENST00000219281 CALD1Q05682 793 aaKnown RBP21.62■■□□□ 1.05
USB1-201ENST00000219281 BMP2KLQ5H9B9 411 aa21.62■■□□□ 1.05
USB1-201ENST00000219281 ARHGAP45Q92619 1136 aa21.62■■□□□ 1.05
USB1-201ENST00000219281 EID1Q9Y6B2 187 aa21.62■■□□□ 1.05
USB1-201ENST00000219281 GNAI1P63096 354 aa21.62■■□□□ 1.05
USB1-201ENST00000219281 GCC1Q96CN9 775 aa21.62■■□□□ 1.05
USB1-201ENST00000219281 SNX21Q969T3 373 aa21.61■■□□□ 1.05
USB1-201ENST00000219281 CHMP4BQ9H444 224 aaKnown RBP21.61■■□□□ 1.05
USB1-201ENST00000219281 MBIPQ9NS73 344 aa21.61■■□□□ 1.05
USB1-201ENST00000219281 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
USB1-201ENST00000219281 ARHGAP23Q9P227 1491 aa21.61■■□□□ 1.05
USB1-201ENST00000219281 XRCC6P12956 609 aaKnown RBP eCLIP21.6■■□□□ 1.05
USB1-201ENST00000219281 IL13P35225 146 aa21.6■■□□□ 1.05
USB1-201ENST00000219281 FSD2A1L4K1 749 aa21.6■■□□□ 1.05
USB1-201ENST00000219281 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.6■■□□□ 1.05
USB1-201ENST00000219281 SLIT1O75093 1534 aa21.6■■□□□ 1.05
USB1-201ENST00000219281 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
USB1-201ENST00000219281 PTCH1Q13635 1447 aa21.59■■□□□ 1.05
USB1-201ENST00000219281 DDIT3P35638 169 aa21.59■■□□□ 1.05
USB1-201ENST00000219281 NCOA3Q9Y6Q9 1424 aa21.59■■□□□ 1.05
USB1-201ENST00000219281 ZNF853P0CG23 659 aa21.58■■□□□ 1.05
USB1-201ENST00000219281 SIRT2Q8IXJ6 389 aa21.58■■□□□ 1.05
USB1-201ENST00000219281 AMOTL2Q9Y2J4 779 aa21.58■■□□□ 1.04
USB1-201ENST00000219281 TBX22Q9Y458 520 aa21.58■■□□□ 1.04
USB1-201ENST00000219281 NUTM2FA1L443 756 aa21.57■■□□□ 1.04
USB1-201ENST00000219281 HSP90AB1P08238 724 aaKnown RBP21.57■■□□□ 1.04
USB1-201ENST00000219281 TWISTNBQ3B726 338 aaPredicted RBP21.57■■□□□ 1.04
USB1-201ENST00000219281 THEMISQ8N1K5 641 aaPredicted RBP21.57■■□□□ 1.04
USB1-201ENST00000219281 ABCC4O15439 1325 aa21.57■■□□□ 1.04
USB1-201ENST00000219281 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
USB1-201ENST00000219281 C8orf58Q8NAV2 365 aa21.56■■□□□ 1.04
USB1-201ENST00000219281 KIF2CQ99661 725 aa21.56■■□□□ 1.04
USB1-201ENST00000219281 MAP2P11137 1827 aaKnown RBP21.56■■□□□ 1.04
USB1-201ENST00000219281 DDX11L8A8MPP1 907 aa21.55■■□□□ 1.04
USB1-201ENST00000219281 TBC1D9Q6ZT07 1266 aa21.55■■□□□ 1.04
USB1-201ENST00000219281 RRAGDQ9NQL2 400 aaPredicted RBP21.55■■□□□ 1.04
USB1-201ENST00000219281 COG3Q96JB2 828 aa21.54■■□□□ 1.04
USB1-201ENST00000219281 AATKQ6ZMQ8 1374 aa21.54■■□□□ 1.04
USB1-201ENST00000219281 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
USB1-201ENST00000219281 PANK2Q9BZ23 570 aa21.54■■□□□ 1.04
USB1-201ENST00000219281 PLEKHG3A1L390 1219 aa21.53■■□□□ 1.04
USB1-201ENST00000219281 FAM83GA6ND36 823 aa21.53■■□□□ 1.04
USB1-201ENST00000219281 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
USB1-201ENST00000219281 MON2Q7Z3U7 1717 aa21.53■■□□□ 1.04
USB1-201ENST00000219281 ACEP12821 1306 aa21.53■■□□□ 1.04
USB1-201ENST00000219281 TNPO1Q92973 898 aaKnown RBP21.53■■□□□ 1.04
USB1-201ENST00000219281 LMOD3Q0VAK6 560 aa21.52■■□□□ 1.04
USB1-201ENST00000219281 CD2BP2O95400 341 aaKnown RBP21.52■■□□□ 1.03
USB1-201ENST00000219281 DCTN1Q14203 1278 aa21.52■■□□□ 1.03
USB1-201ENST00000219281 API5Q9BZZ5 524 aaKnown RBP21.52■■□□□ 1.03
USB1-201ENST00000219281 CDK12Q9NYV4 1490 aaPredicted RBP21.51■■□□□ 1.03
USB1-201ENST00000219281 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
USB1-201ENST00000219281 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
USB1-201ENST00000219281 CIZ1Q9ULV3 898 aaPredicted RBP21.5■■□□□ 1.03
USB1-201ENST00000219281 TTC21BQ7Z4L5 1316 aa21.5■■□□□ 1.03
USB1-201ENST00000219281 RBM42Q9BTD8 480 aaKnown RBP21.5■■□□□ 1.03
USB1-201ENST00000219281 HSP90AA1P07900 732 aaKnown RBP21.49■■□□□ 1.03
USB1-201ENST00000219281 RAB3GAP1Q15042 981 aa21.48■■□□□ 1.03
USB1-201ENST00000219281 CDC45O75419 566 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms