RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SLIT1O75093 1534 aa11.42□□□□□ -0.58
MTHFD1-201ENST00000216605 ARHGAP23Q9P227 1491 aa11.42□□□□□ -0.58
MTHFD1-201ENST00000216605 ESCO1Q5FWF5 840 aa11.41□□□□□ -0.58
MTHFD1-201ENST00000216605 TRMT2AQ8IZ69 625 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-201ENST00000216605 ABTB2Q8N961 1025 aa11.41□□□□□ -0.58
MTHFD1-201ENST00000216605 CLUAP1Q96AJ1 413 aa11.41□□□□□ -0.58
MTHFD1-201ENST00000216605 MED14O60244 1454 aa11.41□□□□□ -0.58
MTHFD1-201ENST00000216605 CEP170BQ9Y4F5 1589 aaPredicted RBP11.4□□□□□ -0.58
MTHFD1-201ENST00000216605 PLEKHF1Q96S99 279 aa11.4□□□□□ -0.58
MTHFD1-201ENST00000216605 PSME1Q06323 249 aa11.4□□□□□ -0.58
MTHFD1-201ENST00000216605 CCDC27Q2M243 656 aa11.4□□□□□ -0.58
MTHFD1-201ENST00000216605 SULT6B1Q6IMI4 303 aa11.4□□□□□ -0.58
MTHFD1-201ENST00000216605 EXOSC9Q06265 439 aaKnown RBP11.4□□□□□ -0.59
MTHFD1-201ENST00000216605 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.59
MTHFD1-201ENST00000216605 THUMPD2Q9BTF0 503 aaKnown RBP11.4□□□□□ -0.59
MTHFD1-201ENST00000216605 PROSER2Q86WR7 435 aaPredicted RBP11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 IL13P35225 146 aa11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 HSP90AB2PQ58FF8 381 aa11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 PANK1Q8TE04 598 aa11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 SHPRHQ149N8 1683 aa11.39□□□□□ -0.59
MTHFD1-201ENST00000216605 CDC42BPGQ6DT37 1551 aa11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 FTSJ3Q8IY81 847 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 KNDC1Q76NI1 1749 aa11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 USP6P35125 1406 aa11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 RARSP54136 660 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
MTHFD1-201ENST00000216605 XPCQ01831 940 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-201ENST00000216605 NFE2L2Q16236 605 aa11.37□□□□□ -0.59
MTHFD1-201ENST00000216605 PNPLA6Q8IY17 1366 aa11.37□□□□□ -0.59
MTHFD1-201ENST00000216605 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-201ENST00000216605 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
MTHFD1-201ENST00000216605 PTCH1Q13635 1447 aa11.36□□□□□ -0.59
MTHFD1-201ENST00000216605 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
MTHFD1-201ENST00000216605 MAP2P11137 1827 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-201ENST00000216605 CALD1Q05682 793 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-201ENST00000216605 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
MTHFD1-201ENST00000216605 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 SETD1BQ9UPS6 1966 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 TCERG1O14776 1098 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 LMOD3Q0VAK6 560 aa11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 DCTN1Q14203 1278 aa11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 ITSN1Q15811 1721 aa11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 FOXO3O43524 673 aa11.35□□□□□ -0.59
MTHFD1-201ENST00000216605 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 NPHP4O75161 1426 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 IQSEC2Q5JU85 1478 aa11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 ANKRD26Q9UPS8 1709 aa11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 HSPA2P54652 639 aa11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 SKAP1Q86WV1 359 aa11.34□□□□□ -0.59
MTHFD1-201ENST00000216605 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
MTHFD1-201ENST00000216605 RGS3P49796 1198 aa11.33□□□□□ -0.6
MTHFD1-201ENST00000216605 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
MTHFD1-201ENST00000216605 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.6
MTHFD1-201ENST00000216605 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
MTHFD1-201ENST00000216605 TNNQ9UQP3 1299 aa11.33□□□□□ -0.6
MTHFD1-201ENST00000216605 GNAI1P63096 354 aa11.32□□□□□ -0.6
MTHFD1-201ENST00000216605 ORAI2Q96SN7 254 aa11.32□□□□□ -0.6
MTHFD1-201ENST00000216605 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-201ENST00000216605 ITPRIPQ8IWB1 547 aa11.31□□□□□ -0.6
MTHFD1-201ENST00000216605 SSH1Q8WYL5 1049 aa11.31□□□□□ -0.6
MTHFD1-201ENST00000216605 ATF3P18847 181 aa11.31□□□□□ -0.6
MTHFD1-201ENST00000216605 CENPQQ7L2Z9 268 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-201ENST00000216605 IL16Q14005 1332 aa11.31□□□□□ -0.6
MTHFD1-201ENST00000216605 MCM10Q7L590 875 aa11.31□□□□□ -0.6
MTHFD1-201ENST00000216605 DZIP1LQ8IYY4 767 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-201ENST00000216605 LRRC7Q96NW7 1537 aa11.3□□□□□ -0.6
MTHFD1-201ENST00000216605 ADGRB2O60241 1585 aa11.3□□□□□ -0.6
MTHFD1-201ENST00000216605 MS4A1P11836 297 aa11.3□□□□□ -0.6
MTHFD1-201ENST00000216605 IPO8O15397 1037 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-201ENST00000216605 NOB1Q9ULX3 412 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-201ENST00000216605 CT47B1P0C2W7 299 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 PDE4AP27815 886 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 ARID3AQ99856 593 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 RLBP1P12271 317 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 FLT4P35916 1363 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
MTHFD1-201ENST00000216605 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-201ENST00000216605 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
MTHFD1-201ENST00000216605 EYA1Q99502 592 aa11.28□□□□□ -0.6
MTHFD1-201ENST00000216605 MBIPQ9NS73 344 aa11.28□□□□□ -0.6
MTHFD1-201ENST00000216605 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
MTHFD1-201ENST00000216605 IFT57Q9NWB7 429 aa11.28□□□□□ -0.6
MTHFD1-201ENST00000216605 SBNO1A3KN83 1393 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms