RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 TOMM22Q9NS69 142 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 PRAG1Q86YV5 1406 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 MCM2P49736 904 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 NCBP1Q09161 790 aaKnown RBP10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 GNL2Q13823 731 aaKnown RBP10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 CEP135Q66GS9 1140 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 ZNF397Q8NF99 534 aaPredicted RBP10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 PAXBP1Q9Y5B6 917 aa10.48□□□□□ -0.73
SUPT16H-201ENST00000216297 CT47B1P0C2W7 299 aaPredicted RBP10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 PTPN14Q15678 1187 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 ZRSR1Q15695 479 aaKnown RBP10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 USP26Q9BXU7 913 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 CWC15Q9P013 229 aaKnown RBP10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 RSPH14Q9UHP6 348 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 KIAA1524Q8TCG1 905 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 MX1P20591 662 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 HOMER1Q86YM7 354 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 C16orf71Q8IYS4 520 aaPredicted RBP10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 ARGLU1Q9NWB6 273 aaPredicted RBP10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 SMC3Q9UQE7 1217 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
SUPT16H-201ENST00000216297 PIK3C2GO75747 1445 aa10.46□□□□□ -0.73
SUPT16H-201ENST00000216297 BICRAQ9NZM4 1560 aa10.46□□□□□ -0.73
SUPT16H-201ENST00000216297 CTNNA3Q9UI47 895 aa10.46□□□□□ -0.73
SUPT16H-201ENST00000216297 SCAPERQ9BY12 1400 aa10.46□□□□□ -0.73
SUPT16H-201ENST00000216297 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.74
SUPT16H-201ENST00000216297 BECN2A8MW95 431 aa10.46□□□□□ -0.74
SUPT16H-201ENST00000216297 FILIP1Q7Z7B0 1213 aa10.46□□□□□ -0.74
SUPT16H-201ENST00000216297 BMS1Q14692 1282 aaKnown RBP10.46□□□□□ -0.74
SUPT16H-201ENST00000216297 DDX41Q9UJV9 622 aaKnown RBP10.46□□□□□ -0.74
SUPT16H-201ENST00000216297 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 SLFN14P0C7P3 912 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 TPM4P67936 248 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 NOM1Q5C9Z4 860 aaKnown RBP10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 CCAR2Q8N163 923 aaKnown RBP10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 RASSF4Q9H2L5 321 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 SLC12A5Q9H2X9 1139 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 RTEL1-TNFRSF6BF6WH68 1400 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 LRMPQ12912 555 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 MNS1Q8NEH6 495 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 ELF2Q15723 593 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 CKAP2LQ8IYA6 745 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 KIF18AQ8NI77 898 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 ANKRD7Q92527 254 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 CHMP4CQ96CF2 233 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 TRAK1Q9UPV9 953 aa10.45□□□□□ -0.74
SUPT16H-201ENST00000216297 ASXL1Q8IXJ9 1541 aa10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 HNRNPH2P55795 449 aaKnown RBP10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 TTC22Q5TAA0 569 aa10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 ZDHHC9Q9Y397 364 aa10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 PRG4Q92954 1404 aaPredicted RBP10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 SDSP20132 328 aa10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 SPTLC3Q9NUV7 552 aa10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 CLIP2Q9UDT6 1046 aa10.44□□□□□ -0.74
SUPT16H-201ENST00000216297 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 ARHGEF12Q9NZN5 1544 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 AK9Q5TCS8 1911 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 SKIDA1Q1XH10 827 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 TMPOP42166 694 aaKnown RBP10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 UBE2HP62256 183 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 SLC4A10Q6U841 1118 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 TMCO3Q6UWJ1 677 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 BICD2Q8TD16 824 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 KRBA2Q6ZNG9 492 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 NEK11Q8NG66 645 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 ST7Q9NRC1 585 aa10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 ZNF215Q9UL58 517 aaPredicted RBP10.43□□□□□ -0.74
SUPT16H-201ENST00000216297 CCDC191Q8NCU4 936 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 TNMDQ9H2S6 317 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 C9orf84Q5VXU9 1444 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 MAP3K11Q16584 847 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 LUZP1Q86V48 1076 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 PLEKHM2Q8IWE5 1019 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 NUP62CLQ9H1M0 184 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 ZNF608Q9ULD9 1512 aaPredicted RBP10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 BRD1O95696 1058 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 CYP2E1P05181 493 aaPredicted RBP10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 CFAP70Q5T0N1 1121 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 HMMRO75330 724 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 DEF6Q9H4E7 631 aa10.42□□□□□ -0.74
SUPT16H-201ENST00000216297 GSPT1P15170 499 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 AK7Q96M32 723 aa10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 UBXN4Q92575 508 aa10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 SECISBP2LQ93073 1101 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 LRRFIP2Q9Y608 721 aaKnown RBP10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 DTNBO60941 627 aa10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 LEKR1Q6ZMV7 388 aa10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 OTUD7AQ8TE49 926 aaPredicted RBP10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
SUPT16H-201ENST00000216297 TXLNBQ8N3L3 684 aa10.4□□□□□ -0.74
SUPT16H-201ENST00000216297 MORC2Q9Y6X9 1032 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-201ENST00000216297 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-201ENST00000216297 SLU7O95391 586 aaKnown RBP10.4□□□□□ -0.74
SUPT16H-201ENST00000216297 LMAN1P49257 510 aa10.4□□□□□ -0.74
SUPT16H-201ENST00000216297 FERMT3Q86UX7 667 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms