RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
APOBEC3D-201ENST00000216099 DUSP27Q5VZP5 1158 aa13.84□□□□□ -0.19
APOBEC3D-201ENST00000216099 CERS3Q8IU89 383 aa13.84□□□□□ -0.19
APOBEC3D-201ENST00000216099 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
APOBEC3D-201ENST00000216099 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
APOBEC3D-201ENST00000216099 MTHFSP49914 203 aa13.83□□□□□ -0.2
APOBEC3D-201ENST00000216099 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
APOBEC3D-201ENST00000216099 CARNS1A5YM72 827 aa13.83□□□□□ -0.2
APOBEC3D-201ENST00000216099 UNCXA6NJT0 531 aa13.83□□□□□ -0.2
APOBEC3D-201ENST00000216099 APAF1O14727 1248 aa13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 WAPLQ7Z5K2 1190 aa13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 ZNF142P52746 1687 aaPredicted RBP13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 NRKQ7Z2Y5 1582 aa13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 EDC4Q6P2E9 1401 aaKnown RBP13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 PLEKHG3A1L390 1219 aa13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 RUNDC1Q96C34 613 aa13.82□□□□□ -0.2
APOBEC3D-201ENST00000216099 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
APOBEC3D-201ENST00000216099 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3D-201ENST00000216099 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3D-201ENST00000216099 POM121Q96HA1 1249 aa13.81□□□□□ -0.2
APOBEC3D-201ENST00000216099 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
APOBEC3D-201ENST00000216099 FYB1O15117 783 aa13.81□□□□□ -0.2
APOBEC3D-201ENST00000216099 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
APOBEC3D-201ENST00000216099 TNNT2P45379 298 aaPredicted RBP13.8□□□□□ -0.2
APOBEC3D-201ENST00000216099 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
APOBEC3D-201ENST00000216099 BARGINQ6ZT62 677 aa13.79□□□□□ -0.2
APOBEC3D-201ENST00000216099 CCDC136Q96JN2 1154 aa13.79□□□□□ -0.2
APOBEC3D-201ENST00000216099 PNPLA6Q8IY17 1366 aa13.78□□□□□ -0.2
APOBEC3D-201ENST00000216099 CEP170BQ9Y4F5 1589 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3D-201ENST00000216099 CCDC27Q2M243 656 aa13.78□□□□□ -0.2
APOBEC3D-201ENST00000216099 PTCH1Q13635 1447 aa13.78□□□□□ -0.2
APOBEC3D-201ENST00000216099 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.2
APOBEC3D-201ENST00000216099 ROBO2Q9HCK4 1378 aa13.77□□□□□ -0.2
APOBEC3D-201ENST00000216099 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
APOBEC3D-201ENST00000216099 EID1Q9Y6B2 187 aa13.77□□□□□ -0.21
APOBEC3D-201ENST00000216099 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
APOBEC3D-201ENST00000216099 LTKP29376 864 aa13.77□□□□□ -0.21
APOBEC3D-201ENST00000216099 TXNDC2Q86VQ3 553 aa13.77□□□□□ -0.21
APOBEC3D-201ENST00000216099 KDM4AO75164 1064 aa13.76□□□□□ -0.21
APOBEC3D-201ENST00000216099 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3D-201ENST00000216099 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
APOBEC3D-201ENST00000216099 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
APOBEC3D-201ENST00000216099 PTPRUQ92729 1446 aa13.75□□□□□ -0.21
APOBEC3D-201ENST00000216099 WDR63Q8IWG1 891 aa13.75□□□□□ -0.21
APOBEC3D-201ENST00000216099 EXOC6Q8TAG9 804 aa13.75□□□□□ -0.21
APOBEC3D-201ENST00000216099 CEBPAP49715 358 aaPredicted RBP13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 PDE4DQ08499 809 aa13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 TCP11L2Q8N4U5 519 aa13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
APOBEC3D-201ENST00000216099 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
APOBEC3D-201ENST00000216099 AATKQ6ZMQ8 1374 aa13.73□□□□□ -0.21
APOBEC3D-201ENST00000216099 SETD1BQ9UPS6 1966 aaKnown RBP13.73□□□□□ -0.21
APOBEC3D-201ENST00000216099 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
APOBEC3D-201ENST00000216099 CHD2O14647 1828 aaKnown RBP13.72□□□□□ -0.21
APOBEC3D-201ENST00000216099 RGPD8O14715 1765 aaPredicted RBP13.72□□□□□ -0.21
APOBEC3D-201ENST00000216099 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
APOBEC3D-201ENST00000216099 PIK3R4Q99570 1358 aa13.72□□□□□ -0.21
APOBEC3D-201ENST00000216099 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
APOBEC3D-201ENST00000216099 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.21
APOBEC3D-201ENST00000216099 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.21
APOBEC3D-201ENST00000216099 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.21
APOBEC3D-201ENST00000216099 AK7Q96M32 723 aa13.71□□□□□ -0.21
APOBEC3D-201ENST00000216099 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
APOBEC3D-201ENST00000216099 PRR36Q9H6K5 1346 aa13.71□□□□□ -0.22
APOBEC3D-201ENST00000216099 MSH5O43196 834 aa13.7□□□□□ -0.22
APOBEC3D-201ENST00000216099 RBM26Q5T8P6 1007 aaKnown RBP13.7□□□□□ -0.22
APOBEC3D-201ENST00000216099 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
APOBEC3D-201ENST00000216099 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
APOBEC3D-201ENST00000216099 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
APOBEC3D-201ENST00000216099 DIAPH1O60610 1272 aaKnown RBP13.69□□□□□ -0.22
APOBEC3D-201ENST00000216099 FGD1P98174 961 aa13.69□□□□□ -0.22
APOBEC3D-201ENST00000216099 CRBNQ96SW2 442 aa13.69□□□□□ -0.22
APOBEC3D-201ENST00000216099 A0A0U1RQG5 324 aaPredicted RBP13.69□□□□□ -0.22
APOBEC3D-201ENST00000216099 TRIM66O15016 1216 aa13.69□□□□□ -0.22
APOBEC3D-201ENST00000216099 PLIN1O60240 522 aa13.69□□□□□ -0.22
APOBEC3D-201ENST00000216099 DLG5Q8TDM6 1919 aa13.68□□□□□ -0.22
APOBEC3D-201ENST00000216099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
APOBEC3D-201ENST00000216099 POLKQ9UBT6 870 aa13.68□□□□□ -0.22
APOBEC3D-201ENST00000216099 IL16Q14005 1332 aa13.67□□□□□ -0.22
APOBEC3D-201ENST00000216099 USP6P35125 1406 aa13.67□□□□□ -0.22
APOBEC3D-201ENST00000216099 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 ANKARQ7Z5J8 1434 aa13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 MAPK8IP3Q9UPT6 1336 aa13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 SSH2Q76I76 1423 aa13.66□□□□□ -0.22
APOBEC3D-201ENST00000216099 U2SURPO15042 1029 aaKnown RBP13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 FCHSD2O94868 740 aa13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 A6NJR5 290 aa13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms