RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 LARP6Q9BRS8 491 aaKnown RBP18.74■□□□□ 0.59
EFNB1-201ENST00000204961 CLASP1Q7Z460 1538 aa18.73■□□□□ 0.59
EFNB1-201ENST00000204961 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
EFNB1-201ENST00000204961 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 ARID3AQ99856 593 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 NLRP1Q9C000 1473 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 MCTP1Q6DN14 999 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 GLI2P10070 1586 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 IL13P35225 146 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 GAS2L3Q86XJ1 694 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 RILPL2Q969X0 211 aa18.72■□□□□ 0.59
EFNB1-201ENST00000204961 L1TD1Q5T7N2 865 aaKnown RBP18.71■□□□□ 0.59
EFNB1-201ENST00000204961 SHPRHQ149N8 1683 aa18.71■□□□□ 0.59
EFNB1-201ENST00000204961 GSPT1P15170 499 aaKnown RBP18.71■□□□□ 0.59
EFNB1-201ENST00000204961 LMOD2Q6P5Q4 547 aa18.71■□□□□ 0.59
EFNB1-201ENST00000204961 PPIP5K1Q6PFW1 1433 aa18.71■□□□□ 0.59
EFNB1-201ENST00000204961 DDX49Q9Y6V7 483 aaKnown RBP18.71■□□□□ 0.58
EFNB1-201ENST00000204961 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
EFNB1-201ENST00000204961 TRIM6-TRIM34B2RNG4 842 aa18.7■□□□□ 0.58
EFNB1-201ENST00000204961 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
EFNB1-201ENST00000204961 NGDNQ8NEJ9 315 aaKnown RBP18.69■□□□□ 0.58
EFNB1-201ENST00000204961 ABCC3O15438 1527 aa18.69■□□□□ 0.58
EFNB1-201ENST00000204961 EIF4A2Q14240 407 aaKnown RBP18.69■□□□□ 0.58
EFNB1-201ENST00000204961 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
EFNB1-201ENST00000204961 ZGPATQ8N5A5 531 aaKnown RBP18.68■□□□□ 0.58
EFNB1-201ENST00000204961 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
EFNB1-201ENST00000204961 CAMSAP1Q5T5Y3 1602 aa18.68■□□□□ 0.58
EFNB1-201ENST00000204961 TRIM44Q96DX7 344 aaPredicted RBP18.68■□□□□ 0.58
EFNB1-201ENST00000204961 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
EFNB1-201ENST00000204961 AMPHP49418 695 aa18.67■□□□□ 0.58
EFNB1-201ENST00000204961 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
EFNB1-201ENST00000204961 ANXA1P04083 346 aa18.67■□□□□ 0.58
EFNB1-201ENST00000204961 IL1RAPL2Q9NP60 686 aa18.67■□□□□ 0.58
EFNB1-201ENST00000204961 VWDEQ8N2E2 1590 aa18.67■□□□□ 0.58
EFNB1-201ENST00000204961 AK9Q5TCS8 1911 aa18.67■□□□□ 0.58
EFNB1-201ENST00000204961 DEPDC5O75140 1603 aa18.67■□□□□ 0.58
EFNB1-201ENST00000204961 ABCA9Q8IUA7 1624 aa18.67■□□□□ 0.58
EFNB1-201ENST00000204961 METP08581 1390 aa18.66■□□□□ 0.58
EFNB1-201ENST00000204961 CFAP44Q96MT7 982 aa18.66■□□□□ 0.58
EFNB1-201ENST00000204961 ALDH1L2Q3SY69 923 aa18.66■□□□□ 0.58
EFNB1-201ENST00000204961 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
EFNB1-201ENST00000204961 GRPEL1Q9HAV7 217 aa18.66■□□□□ 0.58
EFNB1-201ENST00000204961 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
EFNB1-201ENST00000204961 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
EFNB1-201ENST00000204961 CDC45O75419 566 aa18.65■□□□□ 0.58
EFNB1-201ENST00000204961 CT47B1P0C2W7 299 aaPredicted RBP18.65■□□□□ 0.58
EFNB1-201ENST00000204961 CAVIN1Q6NZI2 390 aaKnown RBP18.65■□□□□ 0.58
EFNB1-201ENST00000204961 KIF2CQ99661 725 aa18.65■□□□□ 0.58
EFNB1-201ENST00000204961 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
EFNB1-201ENST00000204961 K7ELQ4 463 aaPredicted RBP18.65■□□□□ 0.58
EFNB1-201ENST00000204961 FRMPD1Q5SYB0 1578 aa18.65■□□□□ 0.58
EFNB1-201ENST00000204961 BMP2KLQ5H9B9 411 aa18.64■□□□□ 0.58
EFNB1-201ENST00000204961 NSD2O96028 1365 aa18.64■□□□□ 0.57
EFNB1-201ENST00000204961 AAMPQ13685 434 aa18.64■□□□□ 0.57
EFNB1-201ENST00000204961 API5Q9BZZ5 524 aaKnown RBP18.64■□□□□ 0.57
EFNB1-201ENST00000204961 SDSP20132 328 aa18.64■□□□□ 0.57
EFNB1-201ENST00000204961 GBP4Q96PP9 640 aa18.64■□□□□ 0.57
EFNB1-201ENST00000204961 IFT57Q9NWB7 429 aa18.64■□□□□ 0.57
EFNB1-201ENST00000204961 RNF214Q8ND24 703 aa18.63■□□□□ 0.57
EFNB1-201ENST00000204961 GCC1Q96CN9 775 aa18.63■□□□□ 0.57
EFNB1-201ENST00000204961 UPF3BQ9BZI7 483 aaKnown RBP18.63■□□□□ 0.57
EFNB1-201ENST00000204961 ACEP12821 1306 aa18.63■□□□□ 0.57
EFNB1-201ENST00000204961 NRXN1Q9ULB1 1477 aa18.63■□□□□ 0.57
EFNB1-201ENST00000204961 PRPF40AO75400 957 aaKnown RBP18.62■□□□□ 0.57
EFNB1-201ENST00000204961 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
EFNB1-201ENST00000204961 PKNOX2Q96KN3 472 aa18.62■□□□□ 0.57
EFNB1-201ENST00000204961 PRR36Q9H6K5 1346 aa18.62■□□□□ 0.57
EFNB1-201ENST00000204961 CALD1Q05682 793 aaKnown RBP18.62■□□□□ 0.57
EFNB1-201ENST00000204961 GDPD2Q9HCC8 539 aa18.61■□□□□ 0.57
EFNB1-201ENST00000204961 XPCQ01831 940 aaPredicted RBP18.61■□□□□ 0.57
EFNB1-201ENST00000204961 SIGLEC1Q9BZZ2 1709 aa18.61■□□□□ 0.57
EFNB1-201ENST00000204961 ANO2Q9NQ90 1003 aa18.61■□□□□ 0.57
EFNB1-201ENST00000204961 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
EFNB1-201ENST00000204961 NEK4P51957 841 aa18.6■□□□□ 0.57
EFNB1-201ENST00000204961 NLRP6P59044 892 aa18.6■□□□□ 0.57
EFNB1-201ENST00000204961 IL16Q14005 1332 aa18.6■□□□□ 0.57
EFNB1-201ENST00000204961 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
EFNB1-201ENST00000204961 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
EFNB1-201ENST00000204961 CD163L1Q9NR16 1453 aa18.6■□□□□ 0.57
EFNB1-201ENST00000204961 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
EFNB1-201ENST00000204961 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
EFNB1-201ENST00000204961 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.57
EFNB1-201ENST00000204961 NEXMIFQ5QGS0 1516 aa18.58■□□□□ 0.57
EFNB1-201ENST00000204961 PPLO60437 1756 aa18.58■□□□□ 0.57
EFNB1-201ENST00000204961 GOLGA6L22H0YM25 854 aa18.58■□□□□ 0.56
EFNB1-201ENST00000204961 MSH6P52701 1360 aa18.58■□□□□ 0.56
EFNB1-201ENST00000204961 RBM25P49756 843 aaKnown RBP18.57■□□□□ 0.56
EFNB1-201ENST00000204961 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
EFNB1-201ENST00000204961 TSPOAP1O95153 1857 aa18.57■□□□□ 0.56
EFNB1-201ENST00000204961 LMOD3Q0VAK6 560 aa18.57■□□□□ 0.56
EFNB1-201ENST00000204961 CCDC9Q9Y3X0 531 aaKnown RBP18.57■□□□□ 0.56
EFNB1-201ENST00000204961 PTPRMP28827 1452 aa18.57■□□□□ 0.56
EFNB1-201ENST00000204961 MLH3Q9UHC1 1453 aa18.57■□□□□ 0.56
EFNB1-201ENST00000204961 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
EFNB1-201ENST00000204961 TTC22Q5TAA0 569 aa18.56■□□□□ 0.56
EFNB1-201ENST00000204961 PLCB2Q00722 1185 aa18.56■□□□□ 0.56
EFNB1-201ENST00000204961 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
EFNB1-201ENST00000204961 ERBB4Q15303 1308 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms