RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 SOX12O15370 315 aa20.43■□□□□ 0.86
LAPTM4A-201ENST00000175091 PAK3O75914 559 aaPredicted RBP20.43■□□□□ 0.86
LAPTM4A-201ENST00000175091 HMOX1P09601 288 aa20.42■□□□□ 0.86
LAPTM4A-201ENST00000175091 RTL1A6NKG5 1358 aa20.42■□□□□ 0.86
LAPTM4A-201ENST00000175091 PSME1Q06323 249 aa20.41■□□□□ 0.86
LAPTM4A-201ENST00000175091 HSP90AB2PQ58FF8 381 aa20.41■□□□□ 0.86
LAPTM4A-201ENST00000175091 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
LAPTM4A-201ENST00000175091 ARHGEF10O15013 1369 aa20.4■□□□□ 0.86
LAPTM4A-201ENST00000175091 MSH6P52701 1360 aa20.4■□□□□ 0.86
LAPTM4A-201ENST00000175091 ATF3P18847 181 aa20.4■□□□□ 0.86
LAPTM4A-201ENST00000175091 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
LAPTM4A-201ENST00000175091 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
LAPTM4A-201ENST00000175091 FOXO3O43524 673 aa20.39■□□□□ 0.85
LAPTM4A-201ENST00000175091 NEFMP07197 916 aa20.39■□□□□ 0.85
LAPTM4A-201ENST00000175091 RIPK4P57078 832 aa20.38■□□□□ 0.85
LAPTM4A-201ENST00000175091 CADPS2Q86UW7 1296 aa20.38■□□□□ 0.85
LAPTM4A-201ENST00000175091 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
LAPTM4A-201ENST00000175091 IL16Q14005 1332 aa20.37■□□□□ 0.85
LAPTM4A-201ENST00000175091 KDRP35968 1356 aa20.37■□□□□ 0.85
LAPTM4A-201ENST00000175091 NFE2L2Q16236 605 aa20.36■□□□□ 0.85
LAPTM4A-201ENST00000175091 AMPHP49418 695 aa20.36■□□□□ 0.85
LAPTM4A-201ENST00000175091 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
LAPTM4A-201ENST00000175091 HOXC9P31274 260 aa20.35■□□□□ 0.85
LAPTM4A-201ENST00000175091 AEBP1Q8IUX7 1158 aa20.35■□□□□ 0.85
LAPTM4A-201ENST00000175091 MYH16Q9H6N6 1097 aa20.35■□□□□ 0.85
LAPTM4A-201ENST00000175091 USP19O94966 1318 aa20.35■□□□□ 0.85
LAPTM4A-201ENST00000175091 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
LAPTM4A-201ENST00000175091 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
LAPTM4A-201ENST00000175091 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
LAPTM4A-201ENST00000175091 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.85
LAPTM4A-201ENST00000175091 PXDNQ92626 1479 aa20.33■□□□□ 0.84
LAPTM4A-201ENST00000175091 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.84
LAPTM4A-201ENST00000175091 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.84
LAPTM4A-201ENST00000175091 KCNH5Q8NCM2 988 aa20.33■□□□□ 0.84
LAPTM4A-201ENST00000175091 MED1Q15648 1581 aaPredicted RBP20.32■□□□□ 0.84
LAPTM4A-201ENST00000175091 PLIN1O60240 522 aa20.31■□□□□ 0.84
LAPTM4A-201ENST00000175091 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
LAPTM4A-201ENST00000175091 NPHP3Q7Z494 1330 aa20.29■□□□□ 0.84
LAPTM4A-201ENST00000175091 CAMTA1Q9Y6Y1 1673 aa20.29■□□□□ 0.84
LAPTM4A-201ENST00000175091 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
LAPTM4A-201ENST00000175091 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
LAPTM4A-201ENST00000175091 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.28■□□□□ 0.84
LAPTM4A-201ENST00000175091 EYA1Q99502 592 aa20.28■□□□□ 0.84
LAPTM4A-201ENST00000175091 RGPD2P0DJD1 1756 aa20.28■□□□□ 0.84
LAPTM4A-201ENST00000175091 EXOC6Q8TAG9 804 aa20.27■□□□□ 0.84
LAPTM4A-201ENST00000175091 IP6K1Q92551 441 aa20.27■□□□□ 0.84
LAPTM4A-201ENST00000175091 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
LAPTM4A-201ENST00000175091 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
LAPTM4A-201ENST00000175091 BCAR3O75815 825 aa20.26■□□□□ 0.83
LAPTM4A-201ENST00000175091 GCP02774 474 aa20.26■□□□□ 0.83
LAPTM4A-201ENST00000175091 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
LAPTM4A-201ENST00000175091 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
LAPTM4A-201ENST00000175091 LRRC37A3O60309 1634 aa20.26■□□□□ 0.83
LAPTM4A-201ENST00000175091 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
LAPTM4A-201ENST00000175091 RARSP54136 660 aaKnown RBP20.24■□□□□ 0.83
LAPTM4A-201ENST00000175091 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
LAPTM4A-201ENST00000175091 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
LAPTM4A-201ENST00000175091 BRINP3Q76B58 766 aa20.23■□□□□ 0.83
LAPTM4A-201ENST00000175091 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
LAPTM4A-201ENST00000175091 LMOD2Q6P5Q4 547 aa20.23■□□□□ 0.83
LAPTM4A-201ENST00000175091 DDX17Q92841 729 aaKnown RBP20.23■□□□□ 0.83
LAPTM4A-201ENST00000175091 ABCC6O95255 1503 aa20.23■□□□□ 0.83
LAPTM4A-201ENST00000175091 NCAPD2Q15021 1401 aa20.23■□□□□ 0.83
LAPTM4A-201ENST00000175091 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
LAPTM4A-201ENST00000175091 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
LAPTM4A-201ENST00000175091 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
LAPTM4A-201ENST00000175091 IFT57Q9NWB7 429 aa20.22■□□□□ 0.83
LAPTM4A-201ENST00000175091 LMO7Q8WWI1 1683 aa20.21■□□□□ 0.83
LAPTM4A-201ENST00000175091 COL18A1P39060 1754 aa20.21■□□□□ 0.83
LAPTM4A-201ENST00000175091 ZNF853P0CG23 659 aa20.21■□□□□ 0.83
LAPTM4A-201ENST00000175091 ABCA3Q99758 1704 aa20.2■□□□□ 0.82
LAPTM4A-201ENST00000175091 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
LAPTM4A-201ENST00000175091 SPATA31A3Q5VYP0 1347 aa20.2■□□□□ 0.82
LAPTM4A-201ENST00000175091 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
LAPTM4A-201ENST00000175091 GNAI1P63096 354 aa20.19■□□□□ 0.82
LAPTM4A-201ENST00000175091 FAM208AQ9UK61 1670 aaKnown RBP20.19■□□□□ 0.82
LAPTM4A-201ENST00000175091 LTV1Q96GA3 475 aaPredicted RBP20.18■□□□□ 0.82
LAPTM4A-201ENST00000175091 MTHFSDQ2M296 383 aaKnown RBP20.18■□□□□ 0.82
LAPTM4A-201ENST00000175091 GAS2L2Q8NHY3 880 aa20.17■□□□□ 0.82
LAPTM4A-201ENST00000175091 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
LAPTM4A-201ENST00000175091 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
LAPTM4A-201ENST00000175091 PDE3AQ14432 1141 aa20.16■□□□□ 0.82
LAPTM4A-201ENST00000175091 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
LAPTM4A-201ENST00000175091 DCTN1Q14203 1278 aa20.16■□□□□ 0.82
LAPTM4A-201ENST00000175091 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
LAPTM4A-201ENST00000175091 CRB1P82279 1406 aa20.16■□□□□ 0.82
LAPTM4A-201ENST00000175091 SOS2Q07890 1332 aaPredicted RBP20.15■□□□□ 0.82
LAPTM4A-201ENST00000175091 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.82
LAPTM4A-201ENST00000175091 NBPF6Q5VWK0 638 aa20.14■□□□□ 0.81
LAPTM4A-201ENST00000175091 NBPF4Q96M43 638 aa20.14■□□□□ 0.81
LAPTM4A-201ENST00000175091 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
LAPTM4A-201ENST00000175091 LAS1LQ9Y4W2 734 aaKnown RBP20.14■□□□□ 0.81
LAPTM4A-201ENST00000175091 USHBP1Q8N6Y0 703 aa20.13■□□□□ 0.81
LAPTM4A-201ENST00000175091 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
LAPTM4A-201ENST00000175091 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
LAPTM4A-201ENST00000175091 ZNF428Q96B54 188 aa20.13■□□□□ 0.81
LAPTM4A-201ENST00000175091 ERBB3P21860 1342 aa20.12■□□□□ 0.81
LAPTM4A-201ENST00000175091 MCM10Q7L590 875 aa20.12■□□□□ 0.81
LAPTM4A-201ENST00000175091 VIRMAQ69YN4 1812 aaKnown RBP20.12■□□□□ 0.81
LAPTM4A-201ENST00000175091 CPDO75976 1380 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms