RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ANKRD24Q8TF21 1146 aa13.85□□□□□ -0.19
PKP2-201ENST00000070846 CCDC158Q5M9N0 1113 aa13.84□□□□□ -0.19
PKP2-201ENST00000070846 SRGAP3O43295 1099 aa13.84□□□□□ -0.19
PKP2-201ENST00000070846 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
PKP2-201ENST00000070846 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
PKP2-201ENST00000070846 ATF7IPQ6VMQ6 1270 aa13.84□□□□□ -0.19
PKP2-201ENST00000070846 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
PKP2-201ENST00000070846 RBM5P52756 815 aaKnown RBP eCLIP13.83□□□□□ -0.19
PKP2-201ENST00000070846 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.19
PKP2-201ENST00000070846 ZNF652Q9Y2D9 606 aa13.83□□□□□ -0.2
PKP2-201ENST00000070846 MAP3K1Q13233 1512 aa13.83□□□□□ -0.2
PKP2-201ENST00000070846 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 ABCC2Q92887 1545 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 ABCC10Q5T3U5 1492 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 SYCP2Q9BX26 1530 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 RIMS2Q9UQ26 1411 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 CSPP1Q1MSJ5 1256 aa13.82□□□□□ -0.2
PKP2-201ENST00000070846 RRP12Q5JTH9 1297 aaKnown RBP13.82□□□□□ -0.2
PKP2-201ENST00000070846 LMTK3Q96Q04 1460 aa13.81□□□□□ -0.2
PKP2-201ENST00000070846 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
PKP2-201ENST00000070846 ATP2B2Q01814 1243 aa13.81□□□□□ -0.2
PKP2-201ENST00000070846 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
PKP2-201ENST00000070846 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
PKP2-201ENST00000070846 ERC1Q8IUD2 1116 aa13.81□□□□□ -0.2
PKP2-201ENST00000070846 CCAR1Q8IX12 1150 aaKnown RBP13.81□□□□□ -0.2
PKP2-201ENST00000070846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
PKP2-201ENST00000070846 FKBP4Q02790 459 aaKnown RBP eCLIP13.8□□□□□ -0.2
PKP2-201ENST00000070846 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
PKP2-201ENST00000070846 PES1O00541 588 aaKnown RBP13.8□□□□□ -0.2
PKP2-201ENST00000070846 NUP160Q12769 1436 aa13.8□□□□□ -0.2
PKP2-201ENST00000070846 GPTP24298 496 aa13.8□□□□□ -0.2
PKP2-201ENST00000070846 IGHMBP2P38935 993 aaKnown RBP13.8□□□□□ -0.2
PKP2-201ENST00000070846 FOSBP53539 338 aa13.8□□□□□ -0.2
PKP2-201ENST00000070846 AAMPQ13685 434 aa13.8□□□□□ -0.2
PKP2-201ENST00000070846 PDE3AQ14432 1141 aa13.8□□□□□ -0.2
PKP2-201ENST00000070846 TTC21BQ7Z4L5 1316 aa13.8□□□□□ -0.2
PKP2-201ENST00000070846 ZBTB3Q9H5J0 574 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 ACSBG1Q96GR2 724 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 VPS37CA5D8V6 355 aaPredicted RBP13.79□□□□□ -0.2
PKP2-201ENST00000070846 FMNL2Q96PY5 1086 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 ATP6V1DQ9Y5K8 247 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 ZSCAN29Q8IWY8 852 aaPredicted RBP13.79□□□□□ -0.2
PKP2-201ENST00000070846 LRRC59Q96AG4 307 aaKnown RBP13.79□□□□□ -0.2
PKP2-201ENST00000070846 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
PKP2-201ENST00000070846 ABCF2Q9UG63 623 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 TBX22Q9Y458 520 aa13.79□□□□□ -0.2
PKP2-201ENST00000070846 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
PKP2-201ENST00000070846 SCAF11Q99590 1463 aaKnown RBP13.78□□□□□ -0.2
PKP2-201ENST00000070846 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
PKP2-201ENST00000070846 AK7Q96M32 723 aa13.78□□□□□ -0.2
PKP2-201ENST00000070846 WDR97A6NE52 1622 aa13.78□□□□□ -0.2
PKP2-201ENST00000070846 TRMT112Q9UI30 125 aaKnown RBP13.78□□□□□ -0.2
PKP2-201ENST00000070846 KDM4AO75164 1064 aa13.77□□□□□ -0.2
PKP2-201ENST00000070846 PHF14O94880 888 aa13.77□□□□□ -0.2
PKP2-201ENST00000070846 CT47B1P0C2W7 299 aaPredicted RBP13.77□□□□□ -0.2
PKP2-201ENST00000070846 DDB1Q16531 1140 aa13.77□□□□□ -0.2
PKP2-201ENST00000070846 TPM4P67936 248 aa13.77□□□□□ -0.21
PKP2-201ENST00000070846 IPO9Q96P70 1041 aaKnown RBP13.77□□□□□ -0.21
PKP2-201ENST00000070846 PTPRKQ15262 1439 aa13.77□□□□□ -0.21
PKP2-201ENST00000070846 MYD88Q99836 296 aa13.77□□□□□ -0.21
PKP2-201ENST00000070846 UGGT2Q9NYU1 1516 aa13.77□□□□□ -0.21
PKP2-201ENST00000070846 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
PKP2-201ENST00000070846 CCDC43Q96MW1 224 aaKnown RBP13.76□□□□□ -0.21
PKP2-201ENST00000070846 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
PKP2-201ENST00000070846 LRRCC1Q9C099 1032 aa13.76□□□□□ -0.21
PKP2-201ENST00000070846 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
PKP2-201ENST00000070846 CDC45O75419 566 aa13.76□□□□□ -0.21
PKP2-201ENST00000070846 KIAA2012Q0VF49 1180 aa13.76□□□□□ -0.21
PKP2-201ENST00000070846 SAFBQ15424 915 aaKnown RBP eCLIP13.76□□□□□ -0.21
PKP2-201ENST00000070846 AACSQ86V21 672 aa13.76□□□□□ -0.21
PKP2-201ENST00000070846 ZCRB1Q8TBF4 217 aaKnown RBP13.76□□□□□ -0.21
PKP2-201ENST00000070846 F6X3S4 739 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 METTL24Q5JXM2 366 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 RPRD2Q5VT52 1461 aaKnown RBP13.75□□□□□ -0.21
PKP2-201ENST00000070846 PTMSP20962 102 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.75□□□□□ -0.21
PKP2-201ENST00000070846 LRP2BPQ9P2M1 347 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 L1TD1Q5T7N2 865 aaKnown RBP13.75□□□□□ -0.21
PKP2-201ENST00000070846 RAI14Q9P0K7 980 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 PDZRN3Q9UPQ7 1066 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 GCP02774 474 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 DBF4Q9UBU7 674 aaPredicted RBP13.75□□□□□ -0.21
PKP2-201ENST00000070846 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 NINLQ9Y2I6 1382 aa13.75□□□□□ -0.21
PKP2-201ENST00000070846 IDH1O75874 414 aaKnown RBP13.74□□□□□ -0.21
PKP2-201ENST00000070846 ANXA1P04083 346 aa13.74□□□□□ -0.21
PKP2-201ENST00000070846 ORAI2Q96SN7 254 aa13.74□□□□□ -0.21
PKP2-201ENST00000070846 ATP2B1P20020 1258 aa13.74□□□□□ -0.21
PKP2-201ENST00000070846 PDE4CQ08493 712 aa13.74□□□□□ -0.21
PKP2-201ENST00000070846 WDR62O43379 1518 aa13.74□□□□□ -0.21
PKP2-201ENST00000070846 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
PKP2-201ENST00000070846 TPD52L1Q16890 204 aaPredicted RBP13.74□□□□□ -0.21
PKP2-201ENST00000070846 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
PKP2-201ENST00000070846 A0A087WZG4 1122 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms