RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 ZFYVE16Q7Z3T8 1539 aa16.84■□□□□ 0.29
TNIP3-201ENST00000057513 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
TNIP3-201ENST00000057513 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
TNIP3-201ENST00000057513 VWDEQ8N2E2 1590 aa16.83■□□□□ 0.29
TNIP3-201ENST00000057513 KIF3BO15066 747 aa16.83■□□□□ 0.28
TNIP3-201ENST00000057513 USP26Q9BXU7 913 aa16.83■□□□□ 0.28
TNIP3-201ENST00000057513 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
TNIP3-201ENST00000057513 RNF214Q8ND24 703 aa16.82■□□□□ 0.28
TNIP3-201ENST00000057513 PLEKHM2Q8IWE5 1019 aa16.81■□□□□ 0.28
TNIP3-201ENST00000057513 CCDC94Q9BW85 323 aaPredicted RBP16.81■□□□□ 0.28
TNIP3-201ENST00000057513 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
TNIP3-201ENST00000057513 ZHX1Q9UKY1 873 aaPredicted RBP16.81■□□□□ 0.28
TNIP3-201ENST00000057513 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
TNIP3-201ENST00000057513 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
TNIP3-201ENST00000057513 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
TNIP3-201ENST00000057513 CHGAP10645 457 aaKnown RBP16.8■□□□□ 0.28
TNIP3-201ENST00000057513 GGNBP2Q9H3C7 697 aa16.8■□□□□ 0.28
TNIP3-201ENST00000057513 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
TNIP3-201ENST00000057513 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
TNIP3-201ENST00000057513 PIK3R4Q99570 1358 aa16.79■□□□□ 0.28
TNIP3-201ENST00000057513 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
TNIP3-201ENST00000057513 JARID2Q92833 1246 aaPredicted RBP16.79■□□□□ 0.28
TNIP3-201ENST00000057513 ST18O60284 1047 aa16.78■□□□□ 0.28
TNIP3-201ENST00000057513 PTMAP06454 111 aaKnown RBP16.78■□□□□ 0.28
TNIP3-201ENST00000057513 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
TNIP3-201ENST00000057513 TTC22Q5TAA0 569 aa16.78■□□□□ 0.28
TNIP3-201ENST00000057513 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
TNIP3-201ENST00000057513 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
TNIP3-201ENST00000057513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
TNIP3-201ENST00000057513 ADGRB1O14514 1584 aa16.78■□□□□ 0.28
TNIP3-201ENST00000057513 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
TNIP3-201ENST00000057513 CABP2Q9NPB3 220 aa16.78■□□□□ 0.28
TNIP3-201ENST00000057513 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
TNIP3-201ENST00000057513 PLEKHG5O94827 1062 aa16.77■□□□□ 0.28
TNIP3-201ENST00000057513 DMTNQ08495 405 aa16.77■□□□□ 0.28
TNIP3-201ENST00000057513 MYRIPQ8NFW9 859 aa16.77■□□□□ 0.28
TNIP3-201ENST00000057513 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
TNIP3-201ENST00000057513 EVC2Q86UK5 1308 aa16.77■□□□□ 0.28
TNIP3-201ENST00000057513 VAMP4O75379 141 aa16.77■□□□□ 0.27
TNIP3-201ENST00000057513 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.27
TNIP3-201ENST00000057513 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.27
TNIP3-201ENST00000057513 CFAP44Q96MT7 982 aa16.77■□□□□ 0.27
TNIP3-201ENST00000057513 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
TNIP3-201ENST00000057513 DNTTIP2Q5QJE6 756 aaKnown RBP16.76■□□□□ 0.27
TNIP3-201ENST00000057513 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
TNIP3-201ENST00000057513 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
TNIP3-201ENST00000057513 ABCC4O15439 1325 aa16.76■□□□□ 0.27
TNIP3-201ENST00000057513 TSC1Q92574 1164 aa16.76■□□□□ 0.27
TNIP3-201ENST00000057513 MBD3O95983 291 aa16.75■□□□□ 0.27
TNIP3-201ENST00000057513 UTP14CQ5TAP6 766 aaKnown RBP16.75■□□□□ 0.27
TNIP3-201ENST00000057513 A0A0U1RQG5 324 aaPredicted RBP16.75■□□□□ 0.27
TNIP3-201ENST00000057513 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
TNIP3-201ENST00000057513 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
TNIP3-201ENST00000057513 DIAPH1O60610 1272 aaKnown RBP16.74■□□□□ 0.27
TNIP3-201ENST00000057513 ZNF710Q8N1W2 664 aa16.74■□□□□ 0.27
TNIP3-201ENST00000057513 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
TNIP3-201ENST00000057513 TSPY26PQ9H489 355 aa16.74■□□□□ 0.27
TNIP3-201ENST00000057513 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
TNIP3-201ENST00000057513 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
TNIP3-201ENST00000057513 MPNDQ8N594 471 aa16.74■□□□□ 0.27
TNIP3-201ENST00000057513 OTUD7AQ8TE49 926 aaPredicted RBP16.74■□□□□ 0.27
TNIP3-201ENST00000057513 ADGRB3O60242 1522 aa16.73■□□□□ 0.27
TNIP3-201ENST00000057513 EFCAB6Q5THR3 1501 aa16.73■□□□□ 0.27
TNIP3-201ENST00000057513 SDSP20132 328 aa16.73■□□□□ 0.27
TNIP3-201ENST00000057513 THUMPD2Q9BTF0 503 aaKnown RBP16.73■□□□□ 0.27
TNIP3-201ENST00000057513 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
TNIP3-201ENST00000057513 ATP7AQ04656 1500 aa16.73■□□□□ 0.27
TNIP3-201ENST00000057513 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
TNIP3-201ENST00000057513 KNDC1Q76NI1 1749 aa16.71■□□□□ 0.27
TNIP3-201ENST00000057513 SAFB2Q14151 953 aaKnown RBP eCLIP16.71■□□□□ 0.27
TNIP3-201ENST00000057513 PRIMPOLQ96LW4 560 aa16.71■□□□□ 0.27
TNIP3-201ENST00000057513 PPLO60437 1756 aa16.71■□□□□ 0.27
TNIP3-201ENST00000057513 FYB1O15117 783 aa16.7■□□□□ 0.26
TNIP3-201ENST00000057513 CASC1Q6TDU7 716 aa16.7■□□□□ 0.26
TNIP3-201ENST00000057513 PRKAR2BP31323 418 aa16.7■□□□□ 0.26
TNIP3-201ENST00000057513 CBX1P83916 185 aa16.7■□□□□ 0.26
TNIP3-201ENST00000057513 PIBF1Q8WXW3 757 aa16.7■□□□□ 0.26
TNIP3-201ENST00000057513 FCHSD2O94868 740 aa16.69■□□□□ 0.26
TNIP3-201ENST00000057513 NOLC1Q14978 699 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNIP3-201ENST00000057513 FANCAO15360 1455 aa16.69■□□□□ 0.26
TNIP3-201ENST00000057513 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
TNIP3-201ENST00000057513 BRD1O95696 1058 aa16.69■□□□□ 0.26
TNIP3-201ENST00000057513 GTF2F1P35269 517 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNIP3-201ENST00000057513 HMGN5P82970 282 aaKnown RBP16.69■□□□□ 0.26
TNIP3-201ENST00000057513 TMX3Q96JJ7 454 aa16.69■□□□□ 0.26
TNIP3-201ENST00000057513 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
TNIP3-201ENST00000057513 REC8O95072 547 aa16.68■□□□□ 0.26
TNIP3-201ENST00000057513 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
TNIP3-201ENST00000057513 GLI2P10070 1586 aa16.68■□□□□ 0.26
TNIP3-201ENST00000057513 ZCCHC11Q5TAX3 1644 aaKnown RBP16.67■□□□□ 0.26
TNIP3-201ENST00000057513 CFAP65Q6ZU64 1925 aaKnown RBP16.67■□□□□ 0.26
TNIP3-201ENST00000057513 APBB1O00213 710 aa16.67■□□□□ 0.26
TNIP3-201ENST00000057513 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
TNIP3-201ENST00000057513 NEK4P51957 841 aa16.67■□□□□ 0.26
TNIP3-201ENST00000057513 SYAP1Q96A49 352 aaPredicted RBP16.67■□□□□ 0.26
TNIP3-201ENST00000057513 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
TNIP3-201ENST00000057513 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
TNIP3-201ENST00000057513 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
TNIP3-201ENST00000057513 PNPLA6Q8IY17 1366 aa16.67■□□□□ 0.26
TNIP3-201ENST00000057513 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms