RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
CX3CL1-201ENST00000006053 VAMP4O75379 141 aa13.06□□□□□ -0.32
CX3CL1-201ENST00000006053 SKOR2Q2VWA4 1001 aaPredicted RBP13.06□□□□□ -0.32
CX3CL1-201ENST00000006053 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
CX3CL1-201ENST00000006053 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
CX3CL1-201ENST00000006053 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
CX3CL1-201ENST00000006053 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
CX3CL1-201ENST00000006053 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
CX3CL1-201ENST00000006053 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
CX3CL1-201ENST00000006053 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
CX3CL1-201ENST00000006053 GOLGA6L22H0YM25 854 aa13.05□□□□□ -0.32
CX3CL1-201ENST00000006053 SIRT2Q8IXJ6 389 aa13.05□□□□□ -0.32
CX3CL1-201ENST00000006053 CHMP4BQ9H444 224 aaKnown RBP13.05□□□□□ -0.32
CX3CL1-201ENST00000006053 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
CX3CL1-201ENST00000006053 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
CX3CL1-201ENST00000006053 CDC45O75419 566 aa13.03□□□□□ -0.32
CX3CL1-201ENST00000006053 NCLP19338 710 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-201ENST00000006053 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-201ENST00000006053 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
CX3CL1-201ENST00000006053 ABCC3O15438 1527 aa13.03□□□□□ -0.32
CX3CL1-201ENST00000006053 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
CX3CL1-201ENST00000006053 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.32
CX3CL1-201ENST00000006053 ZNF428Q96B54 188 aa13.02□□□□□ -0.32
CX3CL1-201ENST00000006053 APBB1O00213 710 aa13.02□□□□□ -0.33
CX3CL1-201ENST00000006053 PTMSP20962 102 aa13.02□□□□□ -0.33
CX3CL1-201ENST00000006053 GNAI1P63096 354 aa13.02□□□□□ -0.33
CX3CL1-201ENST00000006053 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
CX3CL1-201ENST00000006053 FRMPD1Q5SYB0 1578 aa13.02□□□□□ -0.33
CX3CL1-201ENST00000006053 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 NASPP49321 788 aaPredicted RBP13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 C8orf58Q8NAV2 365 aa13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
CX3CL1-201ENST00000006053 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
CX3CL1-201ENST00000006053 MCTP1Q6DN14 999 aa13□□□□□ -0.33
CX3CL1-201ENST00000006053 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
CX3CL1-201ENST00000006053 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
CX3CL1-201ENST00000006053 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
CX3CL1-201ENST00000006053 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
CX3CL1-201ENST00000006053 CFAP74Q9C0B2 1584 aa13□□□□□ -0.33
CX3CL1-201ENST00000006053 FAM83GA6ND36 823 aa13□□□□□ -0.33
CX3CL1-201ENST00000006053 DCTN1Q14203 1278 aa13□□□□□ -0.33
CX3CL1-201ENST00000006053 MED14O60244 1454 aa12.99□□□□□ -0.33
CX3CL1-201ENST00000006053 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
CX3CL1-201ENST00000006053 HECW2Q9P2P5 1572 aa12.99□□□□□ -0.33
CX3CL1-201ENST00000006053 PLEKHM2Q8IWE5 1019 aa12.99□□□□□ -0.33
CX3CL1-201ENST00000006053 SLC52A1Q9NWF4 448 aa12.99□□□□□ -0.33
CX3CL1-201ENST00000006053 FAM135BQ49AJ0 1406 aa12.99□□□□□ -0.33
CX3CL1-201ENST00000006053 ABCC4O15439 1325 aa12.98□□□□□ -0.33
CX3CL1-201ENST00000006053 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
CX3CL1-201ENST00000006053 API5Q9BZZ5 524 aaKnown RBP12.98□□□□□ -0.33
CX3CL1-201ENST00000006053 MLH3Q9UHC1 1453 aa12.98□□□□□ -0.33
CX3CL1-201ENST00000006053 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
CX3CL1-201ENST00000006053 SIGLEC1Q9BZZ2 1709 aa12.98□□□□□ -0.33
CX3CL1-201ENST00000006053 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
CX3CL1-201ENST00000006053 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 CCDC173Q0VFZ6 552 aa12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 RABEP1Q15276 862 aa12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 KLHL40Q2TBA0 621 aa12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 CAVIN1Q6NZI2 390 aaKnown RBP12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 PTPRMP28827 1452 aa12.97□□□□□ -0.33
CX3CL1-201ENST00000006053 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
CX3CL1-201ENST00000006053 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
CX3CL1-201ENST00000006053 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
CX3CL1-201ENST00000006053 PKP1Q13835 747 aa12.96□□□□□ -0.33
CX3CL1-201ENST00000006053 NME9Q86XW9 330 aa12.96□□□□□ -0.33
CX3CL1-201ENST00000006053 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
CX3CL1-201ENST00000006053 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.34
CX3CL1-201ENST00000006053 TTC22Q5TAA0 569 aa12.96□□□□□ -0.34
CX3CL1-201ENST00000006053 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 IL13P35225 146 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 NUCB2P80303 420 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 AK9Q5TCS8 1911 aa12.95□□□□□ -0.34
CX3CL1-201ENST00000006053 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
CX3CL1-201ENST00000006053 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
CX3CL1-201ENST00000006053 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
CX3CL1-201ENST00000006053 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
CX3CL1-201ENST00000006053 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
CX3CL1-201ENST00000006053 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
CX3CL1-201ENST00000006053 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
CX3CL1-201ENST00000006053 PRPF40AO75400 957 aaKnown RBP12.93□□□□□ -0.34
CX3CL1-201ENST00000006053 SDSP20132 328 aa12.93□□□□□ -0.34
CX3CL1-201ENST00000006053 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
CX3CL1-201ENST00000006053 KIAA1211Q6ZU35 1233 aa12.93□□□□□ -0.34
CX3CL1-201ENST00000006053 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
CX3CL1-201ENST00000006053 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 CHAMP1Q96JM3 812 aa12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 PPP1R9BQ96SB3 815 aa12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 PRDM4Q9UKN5 801 aa12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 ST18O60284 1047 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms