RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PDHA1P08559 390 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 CHRM1P11229 460 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-230ENST00000641927 ADRA1AP35348 466 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 ARL4CP56559 192 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 SESN2P58004 480 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-230ENST00000641927 SLC1A5Q15758 541 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 EOGTQ5NDL2 527 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 LRRC8BQ6P9F7 803 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 CACUL1Q86Y37 369 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 PDIK1LQ8N165 341 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 LRIG1Q96JA1 1093 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 ZNF641Q96N77 438 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-230ENST00000641927 KLHL32Q96NJ5 620 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 GABRG3Q99928 467 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 OSBPL1AQ9BXW6 950 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 FRMD8Q9BZ67 464 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-230ENST00000641927 MFSD1Q9H3U5 465 aa17.62■□□□□ 0.41
PHGDH-230ENST00000641927 XAB2Q9HCS7 855 aaKnown RBP17.62■□□□□ 0.41
PHGDH-230ENST00000641927 LOC285095A0A1B0GVY8 99 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 TRAFD1O14545 582 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 ALOX15BO15296 676 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 RNASEH1O60930 286 aaKnown RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 PGLSO95336 258 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 NDST3O95803 873 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 TPH1P17752 444 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 CDH17Q12864 832 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 CAMK2GQ13555 558 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 SIRPB2Q5JXA9 342 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 FNBP1LQ5T0N5 605 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 DENND2CQ68D51 928 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 KIAA1211LQ6NV74 962 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 RANBP10Q6VN20 620 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 ZNF534Q76KX8 674 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 CAND1Q86VP6 1230 aaKnown RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 MMAAQ8IVH4 418 aaKnown RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 RAB21Q9UL25 225 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 ANKRD36A6QL64 1941 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 CPP00450 1065 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 EPOP01588 193 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 HLA-DPA1P20036 260 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 PSMD8P48556 350 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 BBS9Q3SYG4 887 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 HSF5Q4G112 596 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 HP1BP3Q5SSJ5 553 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 PKN3Q6P5Z2 889 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 CENPUQ71F23 418 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 ZNF687Q8N1G0 1237 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 SYNPOQ8N3V7 929 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 EIF1ADQ8N9N8 165 aaKnown RBP17.61■□□□□ 0.41
PHGDH-230ENST00000641927 PIP4K2CQ8TBX8 421 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 TRIB3Q96RU7 358 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 FAM129BQ96TA1 746 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 CASS4Q9NQ75 786 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 SARDHQ9UL12 918 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 PPM1HQ9ULR3 514 aa17.61■□□□□ 0.41
PHGDH-230ENST00000641927 C1QTNF3-AMACRE9PGA6 284 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 AP3B1O00203 1094 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 HTRA2O43464 458 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-230ENST00000641927 BANF1O75531 89 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 PRLP01236 227 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 FGF1P05230 155 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 ATXN1LP0C7T5 689 aaKnown RBP17.6■□□□□ 0.41
PHGDH-230ENST00000641927 MLNP12872 115 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 PDIA2Q13087 525 aaKnown RBP17.6■□□□□ 0.41
PHGDH-230ENST00000641927 ZNF805Q5CZA5 627 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 DNAJC21Q5F1R6 531 aaKnown RBP17.6■□□□□ 0.41
PHGDH-230ENST00000641927 TMIEQ8NEW7 156 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 FLCNQ8NFG4 579 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 VOPP1Q96AW1 172 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 FOXP3Q9BZS1 431 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 MMP17Q9ULZ9 603 aa17.6■□□□□ 0.41
PHGDH-230ENST00000641927 A0A1W2PQF6 199 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 ANKRD66B4E2M5 251 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 FZD6O60353 706 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 PPFIA2O75334 1257 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 FAM153BP0C7A2 387 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 PIRTP0C851 137 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 CTPS1P17812 591 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 COL9A1P20849 921 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 MGAT1P26572 445 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 SLC8A1P32418 973 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 CRADDP78560 199 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 FAM153CQ494X1 144 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 CERCAMQ5T4B2 595 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 DENND5AQ6IQ26 1287 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 CASC4Q6P4E1 433 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 TRIM67Q6ZTA4 783 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 PJA1Q8NG27 643 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 OR2T3Q8NH03 318 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.59■□□□□ 0.41
PHGDH-230ENST00000641927 PPP1R16AQ96I34 528 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 TSPYL1Q9H0U9 437 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 RSPH9Q9H1X1 276 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-230ENST00000641927 SAYSD1Q9NPB0 183 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 DYRK4Q9NR20 520 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 POLR3BQ9NW08 1133 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-230ENST00000641927 BFARQ9NZS9 450 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 MAD1L1Q9Y6D9 718 aa17.59■□□□□ 0.41
PHGDH-230ENST00000641927 A0A1W2PQ67 120 aa17.58■□□□□ 0.41
PHGDH-230ENST00000641927 XPAP23025 273 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms