RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 UGT2B4P06133 528 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 XPAP23025 273 aaPredicted RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 MPSTP25325 297 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 MAP4P27816 1152 aaKnown RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 GRNP28799 593 aaKnown RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 PEX5P50542 639 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 MAZP56270 477 aaKnown RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 RAB15P59190 212 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 B4GALNT1Q00973 533 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 MRPL49Q13405 166 aaKnown RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 HLTFQ14527 1009 aaKnown RBP eCLIP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 LRRC14Q15048 493 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 CBWD6Q4V339 395 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 CBWD3Q5JTY5 395 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 CBWD5Q5RIA9 395 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 SPECC1LQ69YQ0 1117 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 BEND5Q7L4P6 421 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 SETD3Q86TU7 594 aaPredicted RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 TTC7BQ86TV6 843 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 DEFB106AQ8N104 65 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 UBR7Q8N806 425 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 KIAA1524Q8TCG1 905 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 CCDC47Q96A33 483 aaKnown RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 KLHL32Q96NJ5 620 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 MED15Q96RN5 788 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 RBM15Q96T37 977 aaKnown RBP eCLIP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 CTRCQ99895 268 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 ZSWIM1Q9BR11 485 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 SUDS3Q9H7L9 328 aaPredicted RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 ATP13A1Q9HD20 1204 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 OCIAD1Q9NX40 245 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 DONSONQ9NYP3 566 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 DKK3Q9UBP4 350 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 SERTAD1Q9UHV2 236 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 COQ6Q9Y2Z9 468 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 OR1A2Q9Y585 309 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
PHGDH-217ENST00000641455 ARHGEF17Q96PE2 2063 aaPredicted RBP7.93□□□□□ -1.14
PHGDH-217ENST00000641455 F8P00451 2351 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 RNF225M0QZC1 329 aaPredicted RBP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 B4GAT1O43505 415 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 ZNF821O75541 412 aaPredicted RBP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 GRAP2O75791 330 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 SYT1P21579 422 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 OR1E1P30953 314 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 MAN1A1P33908 653 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 LIMK2P53671 638 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 MTA1Q13330 715 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 TRA2AQ13595 282 aaKnown RBP eCLIP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 TAF5Q15542 800 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 NFIL3Q16649 462 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 SNAP47Q5SQN1 464 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 NKAIN2Q5VXU1 208 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 DENND1BQ6P3S1 775 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 OGFOD3Q6PK18 319 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 LRRC31Q6UY01 552 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 ZC3H18Q86VM9 953 aaKnown RBP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 PPM1KQ8N3J5 372 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 PAGE5Q96GU1 130 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 ZNF396Q96N95 335 aaPredicted RBP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 NT5C1BQ96P26 610 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 TEFMQ96QE5 360 aaKnown RBP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 APOOQ9BUR5 198 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 SLC29A3Q9BZD2 475 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 THAP9Q9H5L6 903 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 MPP6Q9NZW5 540 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 PILRAQ9UKJ1 303 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 POLHQ9Y253 713 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 SNX10Q9Y5X0 201 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 ACTL7AQ9Y615 435 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 MRPS18BQ9Y676 258 aaKnown RBP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 KCNMB2Q9Y691 235 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 OAS3Q9Y6K5 1087 aaKnown RBP7.92□□□□□ -1.14
PHGDH-217ENST00000641455 HIVEP3Q5T1R4 2406 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 ITPR3Q14573 2671 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 LRBAP50851 2863 aa7.92□□□□□ -1.14
PHGDH-217ENST00000641455 ANKRD36A6QL64 1941 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 TNRC6AQ8NDV7 1962 aaKnown RBP7.91□□□□□ -1.14
PHGDH-217ENST00000641455 SHANK1Q9Y566 2161 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 ARHGAP10A1A4S6 786 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 WIPF3A6NGB9 483 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 B4E171 279 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 CACNB4O00305 520 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-217ENST00000641455 AREL1O15033 823 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 CETN3O15182 167 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 INPP4BO15327 924 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 ITIH2P19823 946 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 TSPAN7P41732 249 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 GPD2P43304 727 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 ME1P48163 572 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 ARF5P84085 180 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 SLC20A2Q08357 652 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 ABHD18Q0P651 414 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 ERV3-1Q14264 604 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 INPP5AQ14642 412 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 POLD3Q15054 466 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-217ENST00000641455 CLPPQ16740 277 aaPredicted RBP7.91□□□□□ -1.14
PHGDH-217ENST00000641455 WSCD2Q2TBF2 565 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 KCTD16Q68DU8 428 aa7.91□□□□□ -1.14
PHGDH-217ENST00000641455 IRF2BP1Q8IU81 584 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms