RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MRPL38Q96DV4 380 aaKnown RBP9.8□□□□□ -0.84
PHGDH-215ENST00000641371 TRIB3Q96RU7 358 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 TCF12Q99081 682 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 GPR22Q99680 433 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ATP13A3Q9H7F0 1226 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 NOD2Q9HC29 1040 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 SPHK2Q9NRA0 654 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 HCFC1R1Q9NWW0 138 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 HS3ST2Q9Y278 367 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 PLLPQ9Y342 182 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 NOTCH4Q99466 2003 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 ANKRD36A6QL64 1941 aa9.8□□□□□ -0.84
PHGDH-215ENST00000641371 CCDC189A1A4V9 331 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 H2AFYO75367 372 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 SPAG7O75391 227 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 RPP40O75818 363 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 VAPBO95292 243 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 NFATC1O95644 943 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 DHRS4L1P0CG22 281 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 PABPC1P11940 636 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 TPH1P17752 444 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 DRD4P21917 467 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 MZF1P28698 734 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 SERPINA4P29622 427 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 BMP8BP34820 402 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 SLC26A3P40879 764 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 ARCN1P48444 511 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 POU4F1Q01851 419 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 BCL2L1Q07817 233 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 LMAN2Q12907 356 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 ITIH4Q14624 930 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 PDGFRLQ15198 375 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 CNGA3Q16281 694 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 TSNAXIP1Q2TAA8 658 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 PITRM1Q5JRX3 1037 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 RNF187Q5TA31 235 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 ESRP1Q6NXG1 681 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 AFTPHQ6ULP2 937 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 SLC25A41Q8N5S1 370 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 OR52K2Q8NGK3 314 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 RDH11Q8TC12 318 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 ZNF398Q8TD17 642 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 MGARPQ8TDB4 240 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.79□□□□□ -0.842e-7■■■■■ 68.5
PHGDH-215ENST00000641371 RMDN1Q96DB5 314 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 TCEAL4Q96EI5 215 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 VPS39Q96JC1 886 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 SERAC1Q96JX3 654 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 TTC1Q99614 292 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 BBS2Q9BXC9 721 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 TRPV4Q9HBA0 871 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 MAGEE1Q9HCI5 957 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 IARS2Q9NSE4 1012 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 INTS10Q9NVR2 710 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 PIH1D1Q9NWS0 290 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 THG1LQ9NWX6 298 aaKnown RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 LMCD1Q9NZU5 365 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-215ENST00000641371 LHX3Q9UBR4 397 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 TLK1Q9UKI8 766 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 RAI2Q9Y5P3 530 aa9.79□□□□□ -0.84
PHGDH-215ENST00000641371 A0A087X1B8 175 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 GOLGA8CPA6NN73 597 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 ANKRD66B4E2M5 251 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 H7C0S8 307 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 TPP1O14773 563 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 MUSKO15146 869 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 HOXC11O43248 304 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 LDB2O43679 373 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 SNAP91O60641 907 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 SNUPNO95149 360 aaKnown RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 GLP2RO95838 553 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 SRPRAP08240 638 aaKnown RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 NEFHP12036 1026 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 MYOGP15173 224 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 CREB1P16220 341 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 GJA1P17302 382 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 LPOP22079 712 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 FSHRP23945 695 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 ALDH3A1P30838 453 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 ETV4P43268 484 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 RECQLP46063 649 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 LEPRP48357 1165 aaKnown RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 EPHB1P54762 984 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 PTPN5P54829 565 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 SLC12A2P55011 1212 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 WDR4P57081 412 aaKnown RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 ASPHQ12797 758 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 MSLNQ13421 630 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 OLIG2Q13516 323 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 KCNC3Q14003 757 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 SLC5A9Q2M3M2 681 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 FSCBQ5H9T9 825 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 ZDHHC20Q5W0Z9 365 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 TTC19Q6DKK2 380 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-215ENST00000641371 FSTL4Q6MZW2 842 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 CES3Q6UWW8 571 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 TPGS1Q6ZTW0 290 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 GLT6D1Q7Z4J2 308 aa9.78□□□□□ -0.84
PHGDH-215ENST00000641371 KIAA0907Q7Z7F0 614 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms