RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CLPBQ9H078 707 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 RETREG1Q9H6L5 497 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 CATSPERBQ9H7T0 1116 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 ASCL3Q9NQ33 180 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 TAS2R14Q9NYV8 317 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
PHGDH-213ENST00000641272 SALL4Q9UJQ4 1053 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 AP4E1Q9UPM8 1137 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 DAAM1Q9Y4D1 1078 aa16.88■□□□□ 0.29
PHGDH-213ENST00000641272 EME2A4GXA9 379 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-213ENST00000641272 J3KR12 359 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 C6P13671 934 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 RGRP47804 291 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 PPARDQ03181 441 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 STX1AQ16623 288 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 CA9Q16790 459 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 PARP15Q460N3 678 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 PPP1R15BQ5SWA1 713 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 C6orf132Q5T0Z8 1188 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 CFAP58Q5T655 872 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 KCTD16Q68DU8 428 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 SASS6Q6UVJ0 657 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 RBM44Q6ZP01 1051 aaKnown RBP16.87■□□□□ 0.29
PHGDH-213ENST00000641272 RBM43Q6ZSC3 357 aaKnown RBP16.87■□□□□ 0.29
PHGDH-213ENST00000641272 RD3Q7Z3Z2 195 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 ZSWIM9Q86XI8 627 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 HID1Q8IV36 788 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 AOPEPQ8N6M6 819 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 PCDH19Q8TAB3 1148 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 CASKIN2Q8WXE0 1202 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 TSACCQ96A04 125 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-213ENST00000641272 HIC2Q96JB3 615 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 CCDC3Q9BQI4 270 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 CNPY3Q9BT09 278 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 BOCQ9BWV1 1114 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 PDFQ9HBH1 243 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 PCDH12Q9NPG4 1184 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 DOLKQ9UPQ8 538 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 ENTPD2Q9Y5L3 495 aa16.87■□□□□ 0.29
PHGDH-213ENST00000641272 FGF10O15520 208 aaPredicted RBP16.86■□□□□ 0.29
PHGDH-213ENST00000641272 KLK10O43240 276 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 ATP1A3P13637 1013 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 LSSP48449 732 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 PDX1P52945 283 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 YBEYP58557 167 aaPredicted RBP16.86■□□□□ 0.29
PHGDH-213ENST00000641272 ELP6Q0PNE2 266 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 ALG11Q2TAA5 492 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 WSCD2Q2TBF2 565 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 INO80DQ53TQ3 878 aaPredicted RBP16.86■□□□□ 0.29
PHGDH-213ENST00000641272 ARHGAP40Q5TG30 622 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 MCOLN2Q8IZK6 566 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 UMODL1-AS1Q8N2C9 162 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 PDXPQ96GD0 296 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 PEBP4Q96S96 227 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 DHX35Q9H5Z1 703 aaKnown RBP16.86■□□□□ 0.29
PHGDH-213ENST00000641272 THSD1Q9NS62 852 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 WDR70Q9NW82 654 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 NCKIPSDQ9NZQ3 722 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 DKK3Q9UBP4 350 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 GULP1Q9UBP9 304 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 OR1A2Q9Y585 309 aa16.86■□□□□ 0.29
PHGDH-213ENST00000641272 WASH4PA8MWX3 477 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 LMO7DNF2Z398 122 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 AGRPO00253 132 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 TPP1O14773 563 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 YY2O15391 372 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 DXOO77932 396 aaKnown RBP16.85■□□□□ 0.29
PHGDH-213ENST00000641272 CDK11BP21127 795 aaKnown RBP16.85■□□□□ 0.29
PHGDH-213ENST00000641272 PSMA2P25787 234 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 MMP12P39900 470 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 RPIAP49247 311 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 TMPRSS3P57727 454 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 YPEL5P62699 121 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 LRRC14Q15048 493 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 TMEM52BQ4KMG9 183 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 BROXQ5VW32 411 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 PCSK4Q6UW60 755 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 ENPP7Q6UWV6 458 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 APTXQ7Z2E3 356 aaKnown RBP16.85■□□□□ 0.29
PHGDH-213ENST00000641272 CAMK1DQ8IU85 385 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 GLMNQ92990 594 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 NAT6Q93015 286 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 ERGIC2Q96RQ1 377 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 KCTD15Q96SI1 283 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-213ENST00000641272 SNRNP25Q9BV90 132 aaKnown RBP16.85■□□□□ 0.29
PHGDH-213ENST00000641272 TRIM7Q9C029 511 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 LRRC19Q9H756 370 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 ANO10Q9NW15 660 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 PCSK1NQ9UHG2 260 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 RABGEF1Q9UJ41 708 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 PADI4Q9UM07 663 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 MFHAS1Q9Y4C4 1052 aa16.85■□□□□ 0.29
PHGDH-213ENST00000641272 TEX51A0A1B0GUA7 166 aa16.84■□□□□ 0.29
PHGDH-213ENST00000641272 TSPAN11A1L157 253 aa16.84■□□□□ 0.29
PHGDH-213ENST00000641272 EEF2KO00418 725 aaKnown RBP16.84■□□□□ 0.29
PHGDH-213ENST00000641272 LZTS3O60299 673 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-213ENST00000641272 BUB1BO60566 1050 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-213ENST00000641272 PRAMEF11O60813 436 aa16.84■□□□□ 0.29
PHGDH-213ENST00000641272 FERP16591 822 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms