RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 DCLRE1AQ6PJP8 1040 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 SH3RF2Q8TEC5 729 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 TMEM79Q9BSE2 394 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 PIF1Q9H611 641 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 NSMCE4AQ9NXX6 385 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 ARHGEF37A1IGU5 675 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 C17orf102A2RUQ5 167 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 LRRC14BA6NHZ5 514 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 A8MT66 165 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 HNRNPRO43390 633 aaKnown RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 SIX3O95343 332 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 TNFAIP8O95379 198 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 SLC7A2P52569 658 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 NSUN2Q08J23 767 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 LRRC23Q53EV4 343 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 HABP4Q5JVS0 413 aaKnown RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 KLC3Q6P597 504 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 PLEKHH3Q7Z736 793 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 RDH11Q8TC12 318 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 DGCR14Q96DF8 476 aaKnown RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 GPR78Q96P69 363 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 CCT7Q99832 543 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 MRPL57Q9BQC6 102 aaKnown RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 FAM105AQ9NUU6 356 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 IPO11Q9UI26 975 aaKnown RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 SLCO1B7G3V0H7 640 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 M0QZ92 97 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 NR5A2O00482 541 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 TADA2AO75478 443 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 GJB3O75712 270 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 BCAS2O75934 225 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 CCR1P32246 355 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 CDH15P55291 814 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 SCAPQ12770 1279 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 REP15Q6BDI9 236 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 DENND5AQ6IQ26 1287 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 ZFP1Q6P2D0 407 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 PIWIL4Q7Z3Z4 852 aaKnown RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 ARHGAP22Q7Z5H3 698 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 C14orf80Q86SX3 495 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 HERC6Q8IVU3 1022 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 RNF217Q8TC41 542 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 SPPL2BQ8TCT7 592 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 BRI3BPQ8WY22 251 aa14.7□□□□□ -0.06
SCARB2-221ENST00000640341 ZNF512Q96ME7 567 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 PPP1R10Q96QC0 940 aaKnown RBP14.7□□□□□ -0.06
SCARB2-221ENST00000640341 ARL5CA6NH57 179 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 TRIM38O00635 465 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 MAFKO60675 156 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 AXLP30530 894 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 ARCN1P48444 511 aaKnown RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 CDC42EP1Q00587 391 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 GRM2Q14416 872 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 CAPRIN1Q14444 709 aaKnown RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 BNIPLQ7Z465 357 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 CASP10Q92851 521 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 HDAC10Q969S8 669 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 LRCH3Q96II8 777 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 PCDHGA7Q9Y5G6 932 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 LAMA2P24043 3122 aaKnown RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 HEATR9A2RTY3 570 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 C7orf72A4D263 438 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 IPO13O94829 963 aaKnown RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 STAMBPO95630 424 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 LRPAP1P30533 357 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 HADHAP40939 763 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 LSAMPQ13449 338 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 AGAP9Q5VTM2 703 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 C9orf131Q5VYM1 1079 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 MIB1Q86YT6 1006 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 ARHGAP12Q8IWW6 846 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 MARVELD2Q8N4S9 558 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 TMIGD2Q96BF3 282 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 PRICKLE1Q96MT3 831 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 SLC29A1Q99808 456 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 RBM47A0AV96 593 aaKnown RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 NCF1BA6NI72 391 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 NCF1CA8MVU1 366 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 J3KR12 359 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 NCF1P14598 390 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 CHRM3P20309 590 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 PCSK1P29120 753 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 CRYBB1P53674 252 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 GEMP55040 296 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 DSC2Q02487 901 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 PLOD1Q02809 727 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 STX5Q13190 355 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 TRIM25Q14258 630 aaKnown RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 MGAT5BQ3V5L5 792 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 LRRTM3Q86VH5 581 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 BLOC1S5Q8TDH9 187 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 MRGPRX2Q96LB1 330 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 AP5M1Q9H0R1 490 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 CACNA2D2Q9NY47 1150 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 ABI2Q9NYB9 513 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-221ENST00000640341 BTRCQ9Y297 605 aa14.69□□□□□ -0.06
SCARB2-221ENST00000640341 SMIM31A0A1B0GVY4 71 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 TARM1B6A8C7 271 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 ACOT8O14734 319 aa14.68□□□□□ -0.06
SCARB2-221ENST00000640341 VILLO15195 856 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms