RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	PIK3R1	P27986	724 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ACVRL1	P37023	503 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ABL2	P42684	1182 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	KCNQ1	P51787	676 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PRKAA2	P54646	552 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	POLE2	P56282	527 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DSG1	Q02413	1049 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	IRF5	Q13568	498 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SLC9B1	Q4ZJI4	515 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HECTD2	Q5U5R9	776 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	OTUD1	Q5VV17	481 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ASRGL1	Q7L266	308 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PIWIL4	Q7Z3Z4	852 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MRPL10	Q7Z7H8	261 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PCDH20	Q8N6Y1	951 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HEXDC	Q8WVB3	486 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	WDR60	Q8WVS4	1066 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RCN3	Q96D15	328 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CAPNS2	Q96L46	248 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	STN1	Q9H668	368 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SLC24A3	Q9HC58	644 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MID1IP1	Q9NPA3	183 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	VPS45	Q9NRW7	570 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MCM8	Q9UJA3	840 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SH3BP1	Q9Y3L3	701 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FKBP6	O75344	327 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	VPS26A	O75436	327 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TM7SF2	O76062	418 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RAG1	P15918	1043 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TPD52	P55327	224 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PTK2B	Q14289	1009 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TRIP4	Q15650	581 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FBXO48	Q5FWF7	155 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RARS2	Q5T160	578 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RBM20	Q5T481	1227 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TSTD2	Q5T7W7	516 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	GPR158	Q5T848	1215 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	NET1	Q7Z628	596 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TMEM135	Q86UB9	458 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SLC22A9	Q8IVM8	553 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PTGR2	Q8N8N7	351 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RDH11	Q8TC12	318 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FAR2	Q96K12	515 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DNAJC1	Q96KC8	554 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MIPEP	Q99797	713 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TM6SF2	Q9BZW4	377 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ZCWPW1	Q9H0M4	648 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RNF208	Q9H0X6	261 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MMADHC	Q9H3L0	296 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	LATS2	Q9NRM7	1088 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	NMRK1	Q9NWW6	199 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TMEM161A	Q9NX61	479 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SRRD	Q9UH36	339 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	AURKC	Q9UQB9	309 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	NR5A2	O00482	541 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HTR7	P34969	479 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	USP46	P62068	366 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RPS24	P62847	133 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	STX5	Q13190	355 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MED21	Q13503	144 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FASTK	Q14296	549 aa	Known RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MS4A13	Q5J8X5	152 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TMEM198	Q66K66	360 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	LINGO4	Q6UY18	593 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SCD5	Q86SK9	330 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HPS6	Q86YV9	775 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DEFB118	Q96PH6	123 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	LENG8	Q96PV6	779 aa	Predicted RBP	7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	OR52B2	Q96RD2	323 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	GPR62	Q9BZJ7	368 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DNAJC28	Q9NX36	388 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	KCTD3	Q9Y597	815 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RGPD3	A6NKT7	1758 aa	Predicted RBP	7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RGPD4	Q7Z3J3	1758 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ZCWPW2	A0A1B0GU75	182 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	BTN3A1	O00481	513 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MAFK	O60675	156 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ALDH1A2	O94788	518 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SPATA31D3	P0C874	917 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HAPLN1	P10915	354 aa	Predicted RBP	7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ANPEP	P15144	967 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ACADS	P16219	412 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	NDST2	P52849	883 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PTPRCAP	Q14761	206 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RNF219	Q5W0B1	726 aa	Predicted RBP	7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PM20D1	Q6GTS8	502 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FAM171B	Q6P995	826 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SPATA31D4	Q6ZUB0	917 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ST13P4	Q8IZP2	240 aa	Predicted RBP	7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SNX31	Q8N9S9	440 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	OR6K2	Q8NGY2	324 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CDC26	Q8NHZ8	85 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ULK4	Q96C45	1275 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ADGRE3	Q9BY15	652 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TAS2R13	Q9NYV9	303 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SCML2	Q9UQR0	700 aa		7.79	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MOXD2P	A6NHM9	499 aa		7.79	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms