RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 C12orf42Q96LP6 360 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CFAP57Q96MR6 1250 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CCDC106Q9BWC9 280 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 LRIT1Q9P2V4 623 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CLIP2Q9UDT6 1046 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 FBXL17Q9UF56 701 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 SLC23A1Q9UHI7 598 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 VPS51Q9UID3 782 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 BAG5Q9UL15 447 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 TMED5Q9Y3A6 229 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ASB3Q9Y575 518 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 ENTPD2Q9Y5L3 495 aa7.53□□□□□ -1.2
NECAP1-220ENST00000639841 CDRT15L2A8MXV6 281 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 GPR89AB7ZAQ6 455 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 M0QYT0 321 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 CFIP05156 583 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 ALPPP05187 535 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 HOXC6P09630 235 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 GPR89BP0CG08 455 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 TPBGLP0DKB5 382 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 ALPPL2P10696 532 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 PNLIPP16233 465 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 ZNF135P52742 658 aaPredicted RBP7.52□□□□□ -1.21
NECAP1-220ENST00000639841 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 HMGCS2P54868 508 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 ADAM17P78536 824 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 COG7P83436 770 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 MXRA7P84157 204 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 MSANTD1Q6ZTZ1 278 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 CHSY3Q70JA7 882 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 ZNF365Q70YC5 407 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 MAML2Q8IZL2 1156 aaPredicted RBP7.52□□□□□ -1.21
NECAP1-220ENST00000639841 KDM1BQ8NB78 822 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 ATAD1Q8NBU5 361 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 LPAR1Q92633 364 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 RAB7BQ96AH8 199 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 KLHL29Q96CT2 875 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 MMRN2Q9H8L6 949 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 MPP6Q9NZW5 540 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 RBPJLQ9UBG7 517 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 PPIEQ9UNP9 301 aaKnown RBP7.52□□□□□ -1.21
NECAP1-220ENST00000639841 PLAGL2Q9UPG8 496 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 CDY1Q9Y6F8 540 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 FOCADQ5VW36 1801 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 CUL9Q8IWT3 2517 aa7.52□□□□□ -1.21
NECAP1-220ENST00000639841 HTTP42858 3142 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 PAPSS1O43252 624 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ADAMTS4O75173 837 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 LETM1O95202 739 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 COX7A2P14406 83 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 BMXP51813 675 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 TIRAPP58753 221 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 SLFN5Q08AF3 891 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 CUL2Q13617 745 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 INSCQ1MX18 579 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ZIK1Q3SY52 487 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 TREML2Q5T2D2 321 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 CACHD1Q5VU97 1274 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ZYG11AQ6WRX3 759 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ZNF280BQ86YH2 543 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 MINDY1Q8N5J2 469 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ASB11Q8WXH4 323 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 TRIB2Q92519 343 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 TUBGCP3Q96CW5 907 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 PAFAH2Q99487 392 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 MGME1Q9BQP7 344 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 SLC46A2Q9BY10 475 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 POLE3Q9NRF9 147 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ALKBH4Q9NXW9 302 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 C6orf203Q9P0P8 240 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ZMAT5Q9UDW3 170 aaKnown RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 CDH22Q9UJ99 828 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 JRKLQ9Y4A0 524 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 U3KQE9 123 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 CYP2D7A0A087X1C5 515 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 LOC105369274A0A096LPK9 316 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 LOC102723532A0A0G2JNH3 316 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 DDTLA6NHG4 134 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 KBTBD13C9JR72 458 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 STRNO43815 780 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 SIX3O95343 332 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ZFYP08048 801 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 C1SP09871 688 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 CCNCP24863 283 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ARL1P40616 181 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ABHD18Q0P651 414 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 MTX1Q13505 466 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 CSHL1Q14406 222 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ZNF273Q14593 569 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 ASTE1Q2TB18 679 aaPredicted RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 TAS1R1Q7RTX1 841 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 SPATA19Q7Z5L4 167 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 OR4N4Q8N0Y3 316 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 POU5F2Q8N7G0 328 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 FAM46DQ8NEK8 389 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 SHCBP1Q8NEM2 672 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 NEK11Q8NG66 645 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 OR6C4Q8NGE1 309 aa7.51□□□□□ -1.21
NECAP1-220ENST00000639841 MRPL38Q96DV4 380 aaKnown RBP7.51□□□□□ -1.21
NECAP1-220ENST00000639841 DTNBP1Q96EV8 351 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms