RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ILF2Q12905 390 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 PRKG2Q13237 762 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 SEMA5AQ13591 1074 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 RETSATQ6NUM9 610 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 ABRAXAS1Q6UWZ7 409 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 NKAPQ8N5F7 415 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 UTP15Q8TED0 518 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 EPS8L2Q9H6S3 715 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 OPTCQ9UBM4 332 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 PRKAG2Q9UGJ0 569 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 TEX264Q9Y6I9 313 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 HNRNPCL2B2RXH8 293 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 SCAMP3O14828 347 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 KPNA6O60684 536 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 IPO13O94829 963 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 MT-CYBP00156 380 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 FGFR1P11362 822 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 NMBRP28336 390 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 TKTP29401 623 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 AIF1P55008 147 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 CWF19L1Q69YN2 538 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 SPESP1Q6UW49 350 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 LDB1Q86U70 411 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 C8orf59Q8N0T1 100 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 CLK4Q9HAZ1 481 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 ST3GAL5Q9UNP4 418 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 ITM2AO43736 263 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 COL6A2P12110 1019 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 PTPN3P26045 913 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 S100A3P33764 101 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 BOP1Q14137 746 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 UBAP2Q5T6F2 1119 aaKnown RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 GPR107Q5VW38 600 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 ANO7Q6IWH7 933 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 LRRC49Q8IUZ0 686 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 MTMR14Q8NCE2 650 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 PLEKHA8Q96JA3 519 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 TRMOQ9BU70 441 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 GBA3Q9H227 469 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 SH3BP4Q9P0V3 963 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 STK39Q9UEW8 545 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 ZMYND8Q9ULU4 1186 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 A0A0J9YYE9 177 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 FFAR3O14843 346 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 GPR42O15529 346 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 EGFRP00533 1210 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 L1CAMP32004 1257 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 HIST2H2ACQ16777 129 aaPredicted RBP16.74■□□□□ 0.27
SCARB2-210ENST00000638567 HIST2H2AA3Q6FI13 130 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 ESRP1Q6NXG1 681 aaKnown RBP16.74■□□□□ 0.27
SCARB2-210ENST00000638567 NECAB2Q7Z6G3 386 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 FSTL5Q8N475 847 aaPredicted RBP16.74■□□□□ 0.27
SCARB2-210ENST00000638567 SNX10Q9Y5X0 201 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 CNTNAP1P78357 1384 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 FAM20BO75063 409 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 SH3BGRLO75368 114 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 RPLP2P05387 115 aaKnown RBP16.74■□□□□ 0.27
SCARB2-210ENST00000638567 DPYSL2Q16555 572 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 ZYG11AQ6WRX3 759 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 C16orf59Q7L2K0 433 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 CCDC28BQ9BUN5 200 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 C9JVG2 144 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 TYROBPO43914 113 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 CHRNGP07510 517 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 FCGRTP55899 365 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 CDK18Q07002 472 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 GALNT3Q14435 633 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 ZNF460Q14592 562 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 KCNJ11Q14654 390 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 BBS7Q8IWZ6 715 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 MRPS31Q92665 395 aaKnown RBP16.74■□□□□ 0.27
SCARB2-210ENST00000638567 LENG1Q96BZ8 264 aaPredicted RBP16.74■□□□□ 0.27
SCARB2-210ENST00000638567 ZFP14Q9HCL3 533 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
SCARB2-210ENST00000638567 CCL22O00626 93 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 RGS14O43566 566 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 NOVP48745 357 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 BNIP2Q12982 314 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TTC23Q5W5X9 447 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 IGDCC3Q8IVU1 814 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 DENND6AQ8IWF6 608 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 SFRP1Q8N474 314 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 UBR7Q8N806 425 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 MINDY3Q9H8M7 445 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 BPIFA1Q9NP55 256 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 PPM1HQ9ULR3 514 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 F7P08709 466 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 CRYBB1P53674 252 aaPredicted RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TNK2Q07912 1038 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TJAP1Q5JTD0 557 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 CLEC6AQ6EIG7 209 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 C11orf96Q7Z7L8 435 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 TRIM69Q86WT6 500 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 HERPUD2Q9BSE4 406 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 FAM105AQ9NUU6 356 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
SCARB2-210ENST00000638567 STAU1O95793 577 aaKnown RBP16.73■□□□□ 0.27
SCARB2-210ENST00000638567 ABCB1P08183 1280 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms