RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 NSMCE1Q8WV22 266 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 ECHDC3Q96DC8 303 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 CALR3Q96L12 384 aaKnown RBP21.98■■□□□ 1.11
SCN1B-206ENST00000638536 ZNF641Q96N77 438 aaPredicted RBP21.98■■□□□ 1.11
SCN1B-206ENST00000638536 CEP41Q9BYV8 373 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 ATP13A3Q9H7F0 1226 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 AASDHPPTQ9NRN7 309 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 RBM22Q9NW64 420 aaKnown RBP eCLIP21.98■■□□□ 1.11
SCN1B-206ENST00000638536 SNX11Q9Y5W9 270 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 CACNA1AO00555 2505 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 IGLON5A6NGN9 336 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 SLC30A4O14863 429 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 TM4SF5O14894 197 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 PAK4O96013 591 aaPredicted RBP21.98■■□□□ 1.11
SCN1B-206ENST00000638536 HLA-DQB2P05538 268 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 ID4P47928 161 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 GRIA4P48058 902 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 BCL2L1Q07817 233 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 ZBTB17Q13105 803 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 UGP2Q16851 508 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 KDM7AQ6ZMT4 941 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 RAB7BQ96AH8 199 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 HAUS1Q96CS2 278 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 SCUBE2Q9NQ36 999 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 GUCA1BQ9UMX6 200 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 ANKRD6Q9Y2G4 727 aa21.98■■□□□ 1.11
SCN1B-206ENST00000638536 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.98■■□□□ 1.11
SCN1B-206ENST00000638536 DCDC2BA2VCK2 349 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 H0Y8X5 98 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 RAD51BO15315 384 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 ZFXP17010 805 aaPredicted RBP21.97■■□□□ 1.11
SCN1B-206ENST00000638536 SERPINA4P29622 427 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 HSPA9P38646 679 aaKnown RBP21.97■■□□□ 1.11
SCN1B-206ENST00000638536 AP1S1P61966 158 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 DSC2Q02487 901 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 AP1B1Q10567 949 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 TRAF2Q12933 501 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 GRM3Q14832 879 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 UAP1L1Q3KQV9 507 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 TIGD7Q6NT04 549 aaPredicted RBP21.97■■□□□ 1.11
SCN1B-206ENST00000638536 CNTD1Q8N815 330 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 FATE1Q969F0 183 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 FEM1CQ96JP0 617 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 SEMA3CQ99985 751 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 PCDH12Q9NPG4 1184 aa21.97■■□□□ 1.11
SCN1B-206ENST00000638536 NEMP1O14524 444 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 TSPAN6O43657 245 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 MMP20O60882 483 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 JCHAINP01591 159 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 SYPP08247 313 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 PYGMP11217 842 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 CD38P28907 300 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 CLDN2P57739 230 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 RPS21P63220 83 aaKnown RBP21.96■■□□□ 1.11
SCN1B-206ENST00000638536 ITKQ08881 620 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 NIPAL4Q0D2K0 466 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 PTPRRQ15256 657 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 SETMARQ53H47 684 aaPredicted RBP21.96■■□□□ 1.11
SCN1B-206ENST00000638536 PRAMEF14Q5SWL7 426 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 NAPEPLDQ6IQ20 393 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 PEX26Q7Z412 305 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 TMEM145Q8NBT3 493 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 HCAR2Q8TDS4 363 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 RBM41Q96IZ5 413 aaKnown RBP21.96■■□□□ 1.11
SCN1B-206ENST00000638536 WRAP53Q9BUR4 548 aaKnown RBP21.96■■□□□ 1.11
SCN1B-206ENST00000638536 SLC17A9Q9BYT1 436 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 AMFRQ9UKV5 643 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 TTLL3Q9Y4R7 772 aa21.96■■□□□ 1.11
SCN1B-206ENST00000638536 CCDC66A2RUB6 948 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 UPK3BL1B0FP48 263 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 UPK3BL2E5RIL1 263 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 RIOK3O14730 519 aaKnown RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 DDX3YO15523 660 aaKnown RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 HTRA2O43464 458 aaPredicted RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 TFDP2Q14188 446 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 HLA-BQ31612 363 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 KIAA1161Q6NSJ0 714 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 BBS5Q8N3I7 341 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 ARRDC2Q8TBH0 407 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 ZNF830Q96NB3 372 aaPredicted RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 IL12RB2Q99665 862 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 CAAP1Q9H8G2 361 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 ATP8A1Q9Y2Q0 1164 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 VILLO15195 856 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 ATXN3P54252 364 aaPredicted RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 RWDD2BP57060 319 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 ZNF211Q13398 564 aaPredicted RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 PDK1Q15118 436 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 PPP2R5EQ16537 467 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 ALG1LQ6GMV1 187 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 BRAT1Q6PJG6 821 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 ADAT2Q7Z6V5 191 aaKnown RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 TXLNBQ8N3L3 684 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 PDCD6IPQ8WUM4 868 aaKnown RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 SMIM14Q96QK8 99 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 KLF6Q99612 283 aaPredicted RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 C1QTNF2Q9BXJ5 285 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 POLR1EQ9GZS1 481 aaKnown RBP21.95■■□□□ 1.1
SCN1B-206ENST00000638536 GAREM1Q9H706 876 aa21.95■■□□□ 1.1
SCN1B-206ENST00000638536 TPX2Q9ULW0 747 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms