RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CCSER2Q9H7U1 834 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 PDCD5O14737 125 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 TFRCP02786 760 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 TTMPQ5BVD1 217 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 TTC7BQ86TV6 843 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 MIA3Q5JRA6 1907 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 USP27XA6NNY8 438 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 AFF1P51825 1210 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 RETSATQ6NUM9 610 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 FBXO10Q9UK96 956 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 SAMD9LQ8IVG5 1584 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 SLC28A2O43868 658 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 RAMP2O60895 175 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 SERPINA4P29622 427 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 MTF1Q14872 753 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 PIGKQ92643 395 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 TBCBQ99426 244 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 PARK7Q99497 189 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 PEX16Q9Y5Y5 336 aa19.46■□□□□ 0.71
CACNA1A-257ENST00000638009 CAMTA2O94983 1202 aa19.46■□□□□ 0.7
CACNA1A-257ENST00000638009 CCNDBP1O95273 360 aa19.46■□□□□ 0.7
CACNA1A-257ENST00000638009 STXBP1P61764 594 aaKnown RBP19.46■□□□□ 0.7
CACNA1A-257ENST00000638009 CBWD6Q4V339 395 aa19.46■□□□□ 0.7
CACNA1A-257ENST00000638009 AGPAT5Q9NUQ2 364 aa19.46■□□□□ 0.7
CACNA1A-257ENST00000638009 ARAP3Q8WWN8 1544 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 MID1O15344 667 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 KCNA5P22460 613 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 PTDSS1P48651 473 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 ACMSDQ8TDX5 336 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 CLPXO76031 633 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 GYPCP04921 128 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 HNF4AP41235 474 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 ELAVL2Q12926 359 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 BEND5Q7L4P6 421 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 PIWIL2Q8TC59 973 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 SPACA7Q96KW9 195 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 GULP1Q9UBP9 304 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 CLDN25C9JDP6 229 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 BUD31P41223 144 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 THOP1P52888 689 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 PCDHGB2Q9Y5G2 931 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 DOCK10Q96BY6 2186 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 F5H6K3 240 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 POLRMTO00411 1230 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 KLRC3Q07444 240 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 SDR16C5Q8N3Y7 309 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 BHMTQ93088 406 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 MREGQ8N565 214 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 SELENOMQ8WWX9 145 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 RPP38P78345 283 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 ELP6Q0PNE2 266 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 RBM44Q6ZP01 1051 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 ILDR2Q71H61 639 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 ANKRD13AQ8IZ07 590 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 MRPL57Q9BQC6 102 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 UXTQ9UBK9 157 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 PCDHGB1Q9Y5G3 927 aa19.45■□□□□ 0.7
CACNA1A-257ENST00000638009 BOP1Q14137 746 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 DNAJC14Q6Y2X3 702 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 DGLUCYQ7Z3D6 616 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 CATP04040 527 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 ADAM17P78536 824 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 DEFA5Q01523 94 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 LENG9Q96B70 501 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 DIRAS2Q96HU8 199 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 ARL5AQ9Y689 179 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 ATP10AO60312 1499 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 SH3D21A4FU49 640 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 S100PBPQ96BU1 408 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 SIPA1Q96FS4 1042 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 KIAA0556O60303 1618 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 PRAMEF33A0A0G2JMD5 474 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 PRAMEF10O60809 474 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 URODP06132 367 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 FIP1L1Q6UN15 594 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 PLAGL2Q9UPG8 496 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 TRIM64BA6NI03 449 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 POMCP01189 267 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 MBL2P11226 248 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 VDRP11473 427 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 C1QBPQ07021 282 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 QRICH1Q2TAL8 776 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 TIGD4Q8IY51 512 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 FCGR1BQ92637 280 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 TMEM68Q96MH6 324 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 BBIP1A8MTZ0 92 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 PITPNM1O00562 1244 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 C12orf56Q8IXR9 622 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 ANKFN1Q8N957 763 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 FAM98AQ8NCA5 519 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 C3orf14Q9HBI5 128 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 TRNAU1APQ9NX07 287 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 ARPC4-TTLL3A0A0A6YYG9 625 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 B3GAT3O94766 335 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 NKAPQ8N5F7 415 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 RDH11Q8TC12 318 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 ZNF75CPQ92670 426 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 NELFAQ9H3P2 528 aa19.44■□□□□ 0.7
CACNA1A-257ENST00000638009 IFT80Q9P2H3 777 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms