RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 BRAT1Q6PJG6 821 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 CAMK1DQ8IU85 385 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 ATPAF2Q8N5M1 289 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 DENND6BQ8NEG7 585 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 VOPP1Q96AW1 172 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 CHP1Q99653 195 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 NHEJ1Q9H9Q4 299 aaPredicted RBP13.94□□□□□ -0.18
PNKP-228ENST00000637325 DNAJC28Q9NX36 388 aa13.94□□□□□ -0.18
PNKP-228ENST00000637325 RCOR3Q9P2K3 495 aaPredicted RBP13.94□□□□□ -0.18
PNKP-228ENST00000637325 SPINT1O43278 529 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 PROS1P07225 676 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 KRT7P08729 469 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 RGRP47804 291 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 PDE1CQ14123 709 aaPredicted RBP13.93□□□□□ -0.18
PNKP-228ENST00000637325 MESDQ14696 234 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 UGP2Q16851 508 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 TMEM52BQ4KMG9 183 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 MAP7D3Q8IWC1 876 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 TSC1Q92574 1164 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 IFT43Q96FT9 208 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
PNKP-228ENST00000637325 ANP32EQ9BTT0 268 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 PCDH12Q9NPG4 1184 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 TOR4AQ9NXH8 423 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 IGF2RP11717 2491 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 ACACAQ13085 2346 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 AKAP13Q12802 2813 aa13.93□□□□□ -0.18
PNKP-228ENST00000637325 ASXL3Q9C0F0 2248 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 TSPAN11A1L157 253 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 H3BM21 787 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
PNKP-228ENST00000637325 LZTS3O60299 673 aaPredicted RBP13.92□□□□□ -0.18
PNKP-228ENST00000637325 CD48P09326 243 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 DGKAP23743 735 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 HSPA9P38646 679 aaKnown RBP13.92□□□□□ -0.18
PNKP-228ENST00000637325 THOP1P52888 689 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 AP1S1P61966 158 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 POLR2LP62875 67 aaKnown RBP13.92□□□□□ -0.18
PNKP-228ENST00000637325 SLC10A7Q0GE19 358 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 PTK2BQ14289 1009 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 PDK2Q15119 407 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 ATP13A4Q4VNC1 1196 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 ZNF542PQ5EBM4 170 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 PARGQ86W56 976 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 SLC22A18ASQ8N1D0 253 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 GALNT15Q8N3T1 639 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 SLC35G2Q8TBE7 412 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 PSKH2Q96QS6 385 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 RP1P56715 2156 aa13.92□□□□□ -0.18
PNKP-228ENST00000637325 SPTY2D1-AS1A0A0U1RR47 76 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.91□□□□□ -0.18
PNKP-228ENST00000637325 FAM221BA6H8Z2 402 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 NEMP2A6NFY4 417 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 FFAR2O15552 330 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 MAFKO60675 156 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 PIAS2O75928 621 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 PRKCGP05129 697 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 ALPPL2P10696 532 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 IL4RP24394 825 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 MAN1A1P33908 653 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 TAS2R40P59535 323 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 HNRNPKP61978 463 aaKnown RBP eCLIP13.91□□□□□ -0.18
PNKP-228ENST00000637325 SEMG2Q02383 582 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 DNAJC3Q13217 504 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 DPYSL3Q14195 570 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 ANKRD20A8PQ5CZ79 823 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 MARC1Q5VT66 337 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 SARM1Q6SZW1 724 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 DHRS13Q6UX07 377 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 KANSL1Q7Z3B3 1105 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 LRRC49Q8IUZ0 686 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 RHOT2Q8IXI1 618 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 SLC25A45Q8N413 288 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 GATA6Q92908 595 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 CENPTQ96BT3 561 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 UCKL1Q9NWZ5 548 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 COQ6Q9Y2Z9 468 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 PCDHGA1Q9Y5H4 931 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 FRYQ5TBA9 3013 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 SPEGQ15772 3267 aa13.91□□□□□ -0.18
PNKP-228ENST00000637325 ARHGEF17Q96PE2 2063 aaPredicted RBP13.91□□□□□ -0.18
PNKP-228ENST00000637325 A0A1W2PQ67 120 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 TTC24A2A3L6 582 aaPredicted RBP13.9□□□□□ -0.18
PNKP-228ENST00000637325 TMEM8BA6NDV4 472 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 TOR1BO14657 336 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 MUSKO15146 869 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 SIGLEC6O43699 453 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 RFPL3O75679 317 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 NEBLO76041 1014 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 DKK1O94907 266 aa13.9□□□□□ -0.18
PNKP-228ENST00000637325 CSF2P04141 144 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms