RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 UGP2Q16851 508 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ZNF284Q2VY69 593 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TMEM259Q4ZIN3 620 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TRIM61Q5EBN2 209 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TCEAL6Q6IPX3 200 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 PRR23CQ6ZRP0 262 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 B4GALNT4Q76KP1 1039 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 RABEPKQ7Z6M1 372 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 HORMAD1Q86X24 394 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 REXO1L1PQ8IX06 675 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 KIAA2013Q8IYS2 634 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 CEP76Q8TAP6 659 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ARRDC2Q8TBH0 407 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TFB1MQ8WVM0 346 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 SNX19Q92543 992 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TCEAL3Q969E4 200 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 HAUS1Q96CS2 278 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 SEMA3CQ99985 751 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 POLR1EQ9GZS1 481 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 MIR1-1HGQ9H1L0 117 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 CAPN10Q9HC96 672 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 SCUBE2Q9NQ36 999 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 SLC6A14Q9UN76 642 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ZFR2Q9UPR6 939 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 PCDHGC4Q9Y5F7 938 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 CACNA1EQ15878 2313 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TRPM6Q9BX84 2022 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 UPK3BL1B0FP48 263 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 HACD1B0YJ81 288 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 PRR5-ARHGAP8B1AHC4 643 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 UPK3BL2E5RIL1 263 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 WNT9AO14904 365 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 SOCS5O75159 536 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ITIH2P19823 946 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 MAT2AP31153 395 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 NUDT1P36639 197 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 POLR2LP62875 67 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 RPS21P63220 83 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 DSC2Q02487 901 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ITKQ08881 620 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 NIPAL4Q0D2K0 466 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 WASHC5Q12768 1159 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TRAF2Q12933 501 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 KLF1Q13351 362 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 NOMO1Q15155 1222 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 RPS6KA1Q15418 735 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TEX44Q53QW1 395 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 LRRC73Q5JTD7 316 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 SEL1L3Q68CR1 1132 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 KIAA1161Q6NSJ0 714 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 PRPF39Q86UA1 669 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ZC3H18Q86VM9 953 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ZCCHC9Q8N567 271 aaKnown RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TRIM58Q8NG06 486 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ACTL9Q8TC94 416 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 FEM1CQ96JP0 617 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ALS2CR12Q96Q35 445 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 C1QTNF2Q9BXJ5 285 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TLR10Q9BXR5 811 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 TM9SF3Q9HD45 589 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 RRAGDQ9NQL2 400 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-210ENST00000635675 RXFP3Q9NSD7 469 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 HAUS2Q9NVX0 235 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 GGT7Q9UJ14 662 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 DMTF1Q9Y222 760 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 ITM2BQ9Y287 266 aa9.82□□□□□ -0.84
LINC00339-210ENST00000635675 PLXNA2O75051 1894 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 KNL1Q8NG31 2342 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 A0A1W2PQ67 120 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 LNP1A1A4G5 178 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 NEMP1O14524 444 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 RIOK3O14730 519 aaKnown RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 ZSCAN12O43309 604 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 MTSS1O43312 755 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 FZD6O60353 706 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 NEBLO76041 1014 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 PGLSO95336 258 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 CFIP05156 583 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 MMP2P08253 660 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 XPAP23025 273 aaPredicted RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 PTPN3P26045 913 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 CSNK1EP49674 416 aaKnown RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 AFF3P51826 1226 aaKnown RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 RACK1P63244 317 aaKnown RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 OTUD4Q01804 1114 aaKnown RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 LMNB2Q03252 620 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 TMEM52BQ4KMG9 183 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 SETMARQ53H47 684 aaPredicted RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 SLC45A4Q5BKX6 768 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 FAM182AQ5T1J6 154 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 CFAP58Q5T655 872 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 CCDC181Q5TID7 509 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 C12orf50Q8NA57 414 aaPredicted RBP9.81□□□□□ -0.84
LINC00339-210ENST00000635675 ASB12Q8WXK4 309 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 SERAC1Q96JX3 654 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 TEKT5Q96M29 485 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 AGAP3Q96P47 875 aa9.81□□□□□ -0.84
LINC00339-210ENST00000635675 QKIQ96PU8 341 aaKnown RBP eCLIP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms