RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ACACBO00763 2458 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 UQCRHLA0A096LP55 91 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 MEI4A8MW99 385 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 DYNC1I1O14576 645 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 MTSS1O43312 755 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 URI1O94763 535 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 DNTTP04053 509 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 UQCRHP07919 91 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 CD68P34810 354 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 CSNK1DP48730 415 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 ATXN3P54252 364 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 SFSWAPQ12872 951 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 ELAVL3Q14576 367 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 TTC31Q49AM3 519 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 ZNF776Q68DI1 518 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 TTC27Q6P3X3 843 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 ZNF567Q8N184 647 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 RYBPQ8N488 228 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 TEKT5Q96M29 485 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 GDAP1L1Q96MZ0 367 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 HOMER3Q9NSC5 361 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 RNF14Q9UBS8 474 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 AMACRQ9UHK6 382 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 PPM1HQ9ULR3 514 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 ZNF148Q9UQR1 794 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 DRG1Q9Y295 367 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 A0A1B0GTW7 788 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 POP4O95707 220 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 IGSF6O95976 241 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 ITGAVP06756 1048 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 PMLP29590 882 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 CHRNA3P32297 505 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 HSPA9P38646 679 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 RECQLP46063 649 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 SCNN1BP51168 640 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 NOVA1P51513 510 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 NIPAL4Q0D2K0 466 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 KCTD19Q17RG1 926 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 N4BP2L1Q5TBK1 243 aaPredicted RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 ALG1LQ6GMV1 187 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 PSAPL1Q6NUJ1 521 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 USP30Q70CQ3 517 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 SRLQ86TD4 932 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 MMAAQ8IVH4 418 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 BBS5Q8N3I7 341 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.84■□□□□ 0.61
PNKP-224ENST00000631020 KIF18AQ8NI77 898 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 ARRDC2Q8TBH0 407 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 OR8D1Q8WZ84 308 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 MAGOHBQ96A72 148 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 HEPHQ9BQS7 1158 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 NOD2Q9HC29 1040 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 DNAAF2Q9NVR5 837 aaKnown RBP18.84■□□□□ 0.61
PNKP-224ENST00000631020 CDC23Q9UJX2 597 aa18.84■□□□□ 0.61
PNKP-224ENST00000631020 NUMA1Q14980 2115 aa18.83■□□□□ 0.61
PNKP-224ENST00000631020 ALOX15BO15296 676 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 RNASEH1O60930 286 aaKnown RBP18.83■□□□□ 0.6
PNKP-224ENST00000631020 PAFAH1B1P43034 410 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 MAPK8P45983 427 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 METAP1P53582 386 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 SHC2P98077 582 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 DSC2Q02487 901 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 ITKQ08881 620 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 ARSIQ5FYB1 569 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 PID1Q7Z2X4 250 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 CACUL1Q86Y37 369 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 CCDC114Q96M63 670 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 NUDCD1Q96RS6 583 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 VAT1Q99536 393 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 SEMA3CQ99985 751 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 POLR1EQ9GZS1 481 aaKnown RBP18.83■□□□□ 0.6
PNKP-224ENST00000631020 BTBD1Q9H0C5 482 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 ZDHHC6Q9H6R6 413 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 SGK2Q9HBY8 427 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 IL36AQ9UHA7 158 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 TTLL3Q9Y4R7 772 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 PCNX2A6NKB5 2137 aa18.83■□□□□ 0.6
PNKP-224ENST00000631020 CFAP69A5D8W1 941 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 C5orf60A6NFR6 353 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 OPHN1O60890 802 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 LEFTY1O75610 366 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 NEBLO76041 1014 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 MMP2P08253 660 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 STIP1P31948 543 aaKnown RBP18.82■□□□□ 0.6
PNKP-224ENST00000631020 COILP38432 576 aaPredicted RBP18.82■□□□□ 0.6
PNKP-224ENST00000631020 SLC14A1Q13336 389 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 UAP1L1Q3KQV9 507 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 ANKRD20A2Q5SQ80 823 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 ANKRD20A1Q5TYW2 823 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 ANKRD20A3Q5VUR7 823 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 NCEH1Q6PIU2 408 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 MTERF4Q7Z6M4 381 aaKnown RBP18.82■□□□□ 0.6
PNKP-224ENST00000631020 PRUNE1Q86TP1 453 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 HDDC3Q8N4P3 179 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 MINDY1Q8N5J2 469 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 GLIS1Q8NBF1 620 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 TMIEQ8NEW7 156 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 CCDC110Q8TBZ0 833 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 GRIN3AQ8TCU5 1115 aa18.82■□□□□ 0.6
PNKP-224ENST00000631020 RTP4Q96DX8 246 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms