RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 ELF4Q99607 663 aaPredicted RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 CDC6Q99741 560 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 MYOCQ99972 504 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 MAK16Q9BXY0 300 aaKnown RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 TNKS2Q9H2K2 1166 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 LRRC19Q9H756 370 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 EPB41L5Q9HCM4 733 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 HOMER3Q9NSC5 361 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 AMACRQ9UHK6 382 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 VPS51Q9UID3 782 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 R3HDM2Q9Y2K5 976 aaKnown RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 ADAMTS20P59510 1910 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 MYLKQ15746 1914 aa9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
SPTAN1-219ENST00000629378 FAM187AA6NFU0 413 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 E9PAM4 449 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 TTI1O43156 1089 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 TNFSF14O43557 240 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 LATO43561 262 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 PLRG1O43660 514 aaKnown RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 RNGTTO60942 597 aaKnown RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 ERLIN1O75477 346 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 ZNF821O75541 412 aaPredicted RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 ITGAVP06756 1048 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 CD48P09326 243 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 PTGIRP43119 386 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 GRK6P43250 576 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 FNTAP49354 379 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 ARSEP51690 589 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 CLCN6P51797 869 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 CDH6P55285 790 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 OXCT1P55809 520 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 NXPH1P58417 271 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 DR1Q01658 176 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 GUCY2DQ02846 1103 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 ADCY2Q08462 1091 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 SNX1Q13596 522 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 DHX34Q14147 1143 aaKnown RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 PDK2Q15119 407 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 ARSIQ5FYB1 569 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 BRMS1LQ5PSV4 323 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 ERMARDQ5T6L9 678 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 TTC27Q6P3X3 843 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 PRPF39Q86UA1 669 aaKnown RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 FAM131BQ86XD5 332 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 PROSER1Q86XN7 944 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 RFX6Q8HWS3 928 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 MAP7D3Q8IWC1 876 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 OR2A12Q8NGT7 310 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 SAP25Q8TEE9 199 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 FAM131CQ96AQ9 280 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 PGAP3Q96FM1 320 aaPredicted RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 SPON2Q9BUD6 331 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 SNRNP25Q9BV90 132 aaKnown RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 CALN1Q9BXU9 219 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 DHX35Q9H5Z1 703 aaKnown RBP9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 GDF3Q9NR23 364 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 GPATCH2LQ9NWQ4 482 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 RRN3Q9NYV6 651 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 PCYOX1Q9UHG3 505 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 EFR3BQ9Y2G0 817 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 LAMA5O15230 3695 aa9.21□□□□□ -0.94
SPTAN1-219ENST00000629378 GOLGA4Q13439 2230 aaKnown RBP9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 CCDC151A5D8V7 595 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 TRABD2BA6NFA1 517 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 FAM72CH0Y354 149 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 KPNA3O00505 521 aaPredicted RBP9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 SLC31A1O15431 190 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 SDC3O75056 442 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 LDOC1O95751 146 aaPredicted RBP9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 F9P00740 461 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 OR1E1P30953 314 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 ACVRL1P37023 503 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 KCNJ1P48048 391 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 CYP4F3Q08477 520 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 MMRN1Q13201 1228 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 DPYSL3Q14195 570 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 CCNG2Q16589 344 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 CA9Q16790 459 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 PIP5KL1Q5T9C9 394 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 FAM72AQ5TYM5 149 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 FAM46CQ5VWP2 391 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 NAPEPLDQ6IQ20 393 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 FAM72DQ6L9T8 149 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 CCDC137Q6PK04 289 aaKnown RBP9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 TMCO3Q6UWJ1 677 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 LRRC31Q6UY01 552 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 BNIPLQ7Z465 357 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 DSG4Q86SJ6 1040 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 FAM72BQ86X60 149 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 JAMLQ86YT9 394 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 CCDC185Q8N715 623 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 HNRNPLLQ8WVV9 542 aaKnown RBP9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 CASKIN2Q8WXE0 1202 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 IFT81Q8WYA0 676 aa9.2□□□□□ -0.94
SPTAN1-219ENST00000629378 ATG4AQ8WYN0 398 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms