RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SOCS5O75159 536 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 NEBLO76041 1014 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 TJP3O95049 919 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 PCDH8O95206 1070 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 JCHAINP01591 159 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 APOC2P02655 101 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 CFIP05156 583 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 HLA-DQB2P05538 268 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 SERPINF2P08697 491 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 TIMP2P16035 220 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 MAT2AP31153 395 aaKnown RBP8.95□□□□□ -0.98
CHD2-216ENST00000629104 NUDT1P36639 197 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 SUOXP51687 545 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 IRX4P78413 519 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 DSC2Q02487 901 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 ITKQ08881 620 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 ZBTB17Q13105 803 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 PRKD1Q15139 912 aaPredicted RBP8.95□□□□□ -0.98
CHD2-216ENST00000629104 NOMO1Q15155 1222 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 UGP2Q16851 508 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 LRRC73Q5JTD7 316 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 CFAP58Q5T655 872 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 MEI1Q5TIA1 1274 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 KIAA1161Q6NSJ0 714 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 B4GALNT4Q76KP1 1039 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 TTC7BQ86TV6 843 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 PRPF39Q86UA1 669 aaKnown RBP8.95□□□□□ -0.98
CHD2-216ENST00000629104 HORMAD1Q86X24 394 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 ZSWIM9Q86XI8 627 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 CNTD1Q8N815 330 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 TRIM58Q8NG06 486 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 TFB1MQ8WVM0 346 aaKnown RBP8.95□□□□□ -0.98
CHD2-216ENST00000629104 SEMA3CQ99985 751 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 NUSAP1Q9BXS6 441 aaKnown RBP8.95□□□□□ -0.98
CHD2-216ENST00000629104 CAPN10Q9HC96 672 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 TM9SF3Q9HD45 589 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 GGT7Q9UJ14 662 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 SLC6A14Q9UN76 642 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 ZFR2Q9UPR6 939 aaKnown RBP8.95□□□□□ -0.98
CHD2-216ENST00000629104 ITM2BQ9Y287 266 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 ATP8A1Q9Y2Q0 1164 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 TTLL3Q9Y4R7 772 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 PCDHGC4Q9Y5F7 938 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 CACNA1EQ15878 2313 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 LAMA1P25391 3075 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 ZNF292O60281 2723 aa8.95□□□□□ -0.98
CHD2-216ENST00000629104 DNAH14Q0VDD8 3507 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 GVINP1Q7Z2Y8 2422 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 A0A1W2PQ67 120 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 HACD1B0YJ81 288 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 NEMP1O14524 444 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 ZSCAN12O43309 604 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 HTRA2O43464 458 aaPredicted RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 ITIH2P19823 946 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 XPAP23025 273 aaPredicted RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 CES1P23141 567 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 GRIA4P48058 902 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 AFF3P51826 1226 aaKnown RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 POLR2LP62875 67 aaKnown RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 RPS21P63220 83 aaKnown RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 RACK1P63244 317 aaKnown RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 OTUD4Q01804 1114 aaKnown RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 LMNB2Q03252 620 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 NIPAL4Q0D2K0 466 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 ELP6Q0PNE2 266 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 CCDC173Q0VFZ6 552 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 TRAF2Q12933 501 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 KLF1Q13351 362 aaPredicted RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 XRCC4Q13426 336 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 IHHQ14623 411 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 RPS6KA1Q15418 735 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 ZNF284Q2VY69 593 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 AASDHQ4L235 1098 aaPredicted RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 SETMARQ53H47 684 aaPredicted RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 SLC45A4Q5BKX6 768 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 CCDC181Q5TID7 509 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 SEL1L3Q68CR1 1132 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 NAPEPLDQ6IQ20 393 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 ZC3H18Q86VM9 953 aaKnown RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 ZSCAN30Q86W11 494 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 REXO1L1PQ8IX06 675 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 PAF1Q8N7H5 531 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 ARRDC2Q8TBH0 407 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 ACTL9Q8TC94 416 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 KLK6Q92876 244 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 FEM1CQ96JP0 617 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 SERAC1Q96JX3 654 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 SLC6A18Q96N87 628 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 QKIQ96PU8 341 aaKnown RBP eCLIP8.94□□□□□ -0.98
CHD2-216ENST00000629104 CEP41Q9BYV8 373 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 PCDH12Q9NPG4 1184 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 FSCN3Q9NQT6 498 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 RXFP3Q9NSD7 469 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 SEPT10Q9P0V9 454 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 DMTF1Q9Y222 760 aa8.94□□□□□ -0.98
CHD2-216ENST00000629104 PTPRZ1P23471 2315 aaPredicted RBP8.94□□□□□ -0.98
CHD2-216ENST00000629104 WDR87Q6ZQQ6 2873 aa8.93□□□□□ -0.98
CHD2-216ENST00000629104 CFAP54Q96N23 3096 aa8.93□□□□□ -0.98
CHD2-216ENST00000629104 GOLGA6L9A6NEM1 432 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms