RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PPHLN1Q8NEY8 458 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 PPP1R16AQ96I34 528 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 CLEC1BQ9P126 229 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ATP5HO75947 161 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ALDH1A2O94788 518 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZWINTO95229 277 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ASLP04424 464 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 CD70P32970 193 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 STK19P49842 368 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 SCAPQ12770 1279 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 RNF43Q68DV7 783 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ERAP2Q6P179 960 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZNF852Q6ZMS4 543 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 Q6ZVU0 165 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 LINC00523Q86TU6 105 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 SMRP1Q8NCR6 262 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 HMGB4Q8WW32 186 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 RAB3IPQ96QF0 476 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 FEM1AQ9BSK4 669 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 CD248Q9HCU0 757 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 SSU72Q9NP77 194 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 IL37Q9NZH6 218 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 CHMP2BQ9UQN3 213 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 DCTN3O75935 186 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 TMCC1O94876 653 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 DLDP09622 509 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 IL10RBQ08334 325 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 FAM46CQ5VWP2 391 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 PPP4R1Q8TF05 950 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ACSS3Q9H6R3 686 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 C8orf33Q9H7E9 229 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 VPS51Q9UID3 782 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 PKP3Q9Y446 797 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 TEX264Q9Y6I9 313 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 COL4A4P53420 1690 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 PIRTP0C851 137 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ALADP13716 330 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 GJA4P35212 333 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 RPL34P49207 117 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 TEX44Q53QW1 395 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 RGL4Q8IZJ4 473 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ARHGAP24Q8N264 748 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 ARL2BPQ9Y2Y0 163 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 RAD54BQ9Y620 910 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC30A1Q9Y6M5 507 aa12.57□□□□□ -0.4
SYNGAP1-207ENST00000628646 MAN2B1O00754 1011 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 RNASEH2AO75792 299 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 SNRPAP09012 282 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 HOXB2P14652 356 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 CCNCP24863 283 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 ARL1P40616 181 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 GRIA2P42262 883 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 POLR2LP62875 67 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC10A7Q0GE19 358 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC12A1Q13621 1099 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 POU6F1Q14863 301 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 PDK4Q16654 411 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 GJD3Q8N144 294 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 SIX5Q8N196 739 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 FBXO36Q8NEA4 188 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLCO1B3Q9NPD5 702 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLCO3A1Q9UIG8 710 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 PCDHGC4Q9Y5F7 938 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 TRIM24O15164 1050 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 MAPK8P45983 427 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC6A11P48066 632 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 KCNJ2P63252 427 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 CDK16Q00536 496 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 DSC2Q02487 901 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 NADSYN1Q6IA69 706 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 VITQ6UXI7 678 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 PARP9Q8IXQ6 854 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 ADGRG2Q8IZP9 1017 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 DCAF4L2Q8NA75 395 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 CHKBQ9Y259 395 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 STARD13Q9Y3M8 1113 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 MATN3O15232 486 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 TIMM44O43615 452 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 CTPS1P17812 591 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 FAM133BQ5BKY9 247 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 ARHGAP36Q6ZRI8 547 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 LRRC6Q86X45 466 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 C4orf33Q8N1A6 199 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 MAGEC3Q8TD91 643 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 NXPE3Q969Y0 559 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 POLMQ9NP87 494 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 TXLNGQ9NUQ3 528 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 TANC1Q9C0D5 1861 aa12.56□□□□□ -0.4
SYNGAP1-207ENST00000628646 ATG2BQ96BY7 2078 aa12.55□□□□□ -0.4
SYNGAP1-207ENST00000628646 C2orf81A6NN90 581 aa12.55□□□□□ -0.4
SYNGAP1-207ENST00000628646 DGKEP52429 567 aa12.55□□□□□ -0.4
SYNGAP1-207ENST00000628646 SGCGQ13326 291 aa12.55□□□□□ -0.4
SYNGAP1-207ENST00000628646 HNRNPDQ14103 355 aaKnown RBP12.55□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZNF77Q15935 545 aa12.55□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC9A4Q6AI14 798 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms