RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MAGOHP61326 146 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ARF5P84085 180 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 DSC2Q02487 901 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 CSRP2Q16527 193 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 SKIDA1Q1XH10 827 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 KLHL38Q2WGJ6 581 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 KBTBD12Q3ZCT8 623 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 TMCO4Q5TGY1 634 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ALG1LQ6GMV1 187 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 NAPEPLDQ6IQ20 393 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 LINC00523Q86TU6 105 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 RALGPS2Q86X27 583 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 TDRPQ86YL5 185 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 UNC5BQ8IZJ1 945 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 RIBC1Q8N443 379 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 DNAAF3Q8N9W5 541 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 SH3RF2Q8TEC5 729 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 CFAP36Q96G28 342 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF599Q96NL3 588 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 LRRC3BQ96PB8 259 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 PPCSQ9HAB8 311 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ATP13A1Q9HD20 1204 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 HAUS2Q9NVX0 235 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 KDELR3O43731 214 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CDH16O75309 829 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 AGTP01019 485 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 GSTA2P09210 222 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 PRKCHP24723 683 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 ATP5DP30049 168 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 STX2P32856 288 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 VIPR2P41587 438 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 OXCT1P55809 520 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 ITKQ08881 620 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 FCHO2Q0JRZ9 810 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 MSLNQ13421 630 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CDH18Q13634 790 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 SIM2Q14190 667 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 LBRQ14739 615 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 RASA2Q15283 850 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF77Q15935 545 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CERCAMQ5T4B2 595 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 FYB2Q5VWT5 728 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CASC4Q6P4E1 433 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 RANBP10Q6VN20 620 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF783Q6ZMS7 281 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 EXOC3L1Q86VI1 746 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CCNJLQ8IV13 435 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 BBS5Q8N3I7 341 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CARNMT1Q8N4J0 409 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 MZB1Q8WU39 189 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 DCAKDQ8WVC6 231 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 BHMTQ93088 406 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 STAMBPL1Q96FJ0 436 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 LMLNQ96KR4 655 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CNTNAP3BQ96NU0 1288 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 FCRL3Q96P31 734 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 NAT9Q9BTE0 207 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 SPON2Q9BUD6 331 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 CNTNAP3Q9BZ76 1288 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 MUC3BQ9H195 1237 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 SLC25A51Q9H1U9 297 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 OCEL1Q9H607 264 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 MOCS1Q9NZB8 636 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 BFARQ9NZS9 450 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 FETUBQ9UGM5 382 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 DCHS1Q96JQ0 3298 aa9.61□□□□□ -0.87
PDLIM5-223ENST00000627587 E2F8A0AVK6 867 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 POC1B-GALNT4F8VUJ3 575 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 ARNTLO00327 626 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 SNAP91O60641 907 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 ALDH1A2O94788 518 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 ADRB1P08588 477 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 NR1D1P20393 614 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 CHRNA4P43681 627 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 SKOR1P84550 965 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 SPEM2Q0P670 501 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 CDH17Q12864 832 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 USP4Q13107 963 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF235Q14590 738 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 MPPE1Q53F39 396 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 RNF219Q5W0B1 726 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 KDM7AQ6ZMT4 941 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 PRR23BQ6ZRT6 265 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 CCDC117Q8IWD4 279 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 IPMKQ8NFU5 416 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 DDI1Q8WTU0 396 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 RSPRY1Q96DX4 576 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 LOXL4Q96JB6 756 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF778Q96MU6 729 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 CYTH2Q99418 400 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 PAFAH2Q99487 392 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 MGME1Q9BQP7 344 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 FEM1AQ9BSK4 669 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 FSD1LQ9BXM9 530 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 PARD6AQ9NPB6 346 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 TDP1Q9NUW8 608 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 THG1LQ9NWX6 298 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 PLK2Q9NYY3 685 aa9.6□□□□□ -0.87
PDLIM5-223ENST00000627587 SAMD15Q9P1V8 674 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms