RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CAPZA3Q96KX2 299 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 TUBGCP5Q96RT8 1024 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 VAT1Q99536 393 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 SEMA3CQ99985 751 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 C10orf88Q9H8K7 445 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 FBXL12Q9NXK8 326 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 SMARCAL1Q9NZC9 954 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 NCKAP1Q9Y2A7 1128 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 ATP8A1Q9Y2Q0 1164 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 THADAQ6YHU6 1953 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 PCDH15Q96QU1 1955 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 SPTBN2O15020 2390 aa14.87□□□□□ -0.03
PNKP-221ENST00000627317 GOLGA6L10A0A0M3HER8 536 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.86□□□□□ -0.03
PNKP-221ENST00000627317 A0A1W2PP55 124 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 TTC24A2A3L6 582 aaPredicted RBP14.86□□□□□ -0.03
PNKP-221ENST00000627317 DCDC2BA2VCK2 349 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 KIF2AO00139 706 aaPredicted RBP14.86□□□□□ -0.03
PNKP-221ENST00000627317 FANCGO15287 622 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 GJB3O75712 270 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 PIGNO95427 931 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 CR2P20023 1033 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 CES1P23141 567 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 ITGB7P26010 798 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 OXTRP30559 389 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 METAP1P53582 386 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 DSC2Q02487 901 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 BCL2L1Q07817 233 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 WASHC5Q12768 1159 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
PNKP-221ENST00000627317 ZNF805Q5CZA5 627 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 TRIM61Q5EBN2 209 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 ALG1LQ6GMV1 187 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 USP30Q70CQ3 517 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 FAM124AQ86V42 546 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 AADATQ8N5Z0 425 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 CNTD1Q8N815 330 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 C1orf216Q8TAB5 229 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 TEKT5Q96M29 485 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 KLHL32Q96NJ5 620 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 GPR174Q9BXC1 333 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 CPEB1Q9BZB8 566 aaKnown RBP14.86□□□□□ -0.03
PNKP-221ENST00000627317 PCED1AQ9H1Q7 454 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 NOD2Q9HC29 1040 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 HOMER3Q9NSC5 361 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 SERGEFQ9UGK8 458 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 TRHDEQ9UKU6 1024 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 ZNF148Q9UQR1 794 aa14.86□□□□□ -0.03
PNKP-221ENST00000627317 SERPINF2P08697 491 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 CA4P22748 312 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 ACSL1P33121 698 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 CCDC15Q0P6D6 951 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 CNTN1Q12860 1018 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 OASLQ15646 514 aaKnown RBP14.85□□□□□ -0.03
PNKP-221ENST00000627317 CCNG2Q16589 344 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 ITPRIPL1Q6GPH6 555 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 NCEH1Q6PIU2 408 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 PID1Q7Z2X4 250 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 CAMK1DQ8IU85 385 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 ZNF567Q8N184 647 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 FAM71DQ8N9W8 422 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 FOXJ1Q92949 421 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 FAM131CQ96AQ9 280 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 ARRDC3Q96B67 414 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 ZNF641Q96N77 438 aaPredicted RBP14.85□□□□□ -0.03
PNKP-221ENST00000627317 TMEM121Q9BTD3 319 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 AP1M1Q9BXS5 423 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 SUV39H2Q9H5I1 410 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 GLOD4Q9HC38 313 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 RSPH14Q9UHP6 348 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 FZD4Q9ULV1 537 aa14.85□□□□□ -0.03
PNKP-221ENST00000627317 METTL12A8MUP2 240 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 PLK4O00444 970 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 OPHN1O60890 802 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 SOCS5O75159 536 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 NDUFS2O75306 463 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 TUBB4AP04350 444 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 NFKB1P19838 968 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 XPAP23025 273 aaPredicted RBP14.84□□□□□ -0.03
PNKP-221ENST00000627317 DRD3P35462 400 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 CD86P42081 329 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 PAFAH1B1P43034 410 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 NEK3P51956 506 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 DUOXA1Q1HG43 343 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 FAM182AQ5T1J6 154 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 FBXL19Q6PCT2 694 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 ARHGEF18Q6ZSZ5 1173 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 ERN2Q76MJ5 926 aaKnown RBP14.84□□□□□ -0.03
PNKP-221ENST00000627317 PARS2Q7L3T8 475 aaKnown RBP14.84□□□□□ -0.03
PNKP-221ENST00000627317 RABEPKQ7Z6M1 372 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 PRELID2Q8N945 189 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 CEP76Q8TAP6 659 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
PNKP-221ENST00000627317 ZNF592Q92610 1267 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 MAGOHBQ96A72 148 aaKnown RBP14.84□□□□□ -0.03
PNKP-221ENST00000627317 SPATA13Q96N96 652 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 ORAI3Q9BRQ5 295 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 HDAC8Q9BY41 377 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 BTBD1Q9H0C5 482 aa14.84□□□□□ -0.03
PNKP-221ENST00000627317 SLC25A51Q9H1U9 297 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms