RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HTRA4P83105 476 aaPredicted RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 NSUN2Q08J23 767 aaKnown RBP eCLIP22.21■■□□□ 1.15
PNKP-220ENST00000627232 ITGA9Q13797 1035 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 KRT72Q14CN4 511 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 CYTH1Q15438 398 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 Q6ZNB5 142 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 MFSD6LQ8IWD5 586 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 ELMO2Q96JJ3 720 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 TMEM237Q96Q45 408 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 TASP1Q9H6P5 420 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 TRPC7Q9HCX4 862 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 SMPD4Q9NXE4 827 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.21■■□□□ 1.15
PNKP-220ENST00000627232 LNPEPQ9UIQ6 1025 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 RUVBL2Q9Y230 463 aaKnown RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 DNAJC16Q9Y2G8 782 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 TYW5A2RUC4 315 aaKnown RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 TRAFD1O14545 582 aaPredicted RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 MGRN1O60291 552 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 GJB3O75712 270 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 GLDCP23378 1020 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 TARSP26639 723 aaKnown RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 SLC12A2P55011 1212 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 AQP5P55064 265 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 KCNJ2P63252 427 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 PRAMEP78395 509 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 HSF5Q4G112 596 aaPredicted RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 C16orf59Q7L2K0 433 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 CILP2Q8IUL8 1156 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 FAM217AQ8IXS0 508 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 TNS4Q8IZW8 715 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 CENPLQ8N0S6 344 aaPredicted RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 FIBCD1Q8N539 461 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.21■■□□□ 1.15
PNKP-220ENST00000627232 GPR150Q8NGU9 434 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 ADAMTS19Q8TE59 1207 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 TSPAN17Q96FV3 270 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 RAB3IPQ96QF0 476 aaPredicted RBP22.21■■□□□ 1.15
PNKP-220ENST00000627232 NUDCD1Q96RS6 583 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 SORT1Q99523 831 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 MUC3BQ9H195 1237 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 NOD2Q9HC29 1040 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 OXSMQ9NWU1 459 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 NUMBLQ9Y6R0 609 aa22.21■■□□□ 1.15
PNKP-220ENST00000627232 FCHO1O14526 889 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 GREM1O60565 184 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 TBL1XO60907 577 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 LYPLA1O75608 230 aaPredicted RBP22.2■■□□□ 1.14
PNKP-220ENST00000627232 KLHL2O95198 593 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 CNPP09543 421 aaKnown RBP22.2■■□□□ 1.14
PNKP-220ENST00000627232 HDCP19113 662 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 SAT1P21673 171 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 TAS2R39P59534 338 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 LRRC8EQ6NSJ5 796 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 CNSTQ6PJW8 725 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 CCDC149Q6ZUS6 474 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 CEP97Q8IW35 865 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 TMEM151AQ8N4L1 468 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 ARL14EPQ8N8R7 260 aaPredicted RBP22.2■■□□□ 1.14
PNKP-220ENST00000627232 GPATCH11Q8N954 259 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 STYXQ8WUJ0 223 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 KCTD4Q8WVF5 259 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 HDAC10Q969S8 669 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 SLC22A12Q96S37 553 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 CYP2S1Q96SQ9 504 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 SCUBE2Q9NQ36 999 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 FBXO6Q9NRD1 293 aaPredicted RBP22.2■■□□□ 1.14
PNKP-220ENST00000627232 HAO1Q9UJM8 370 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 ACTL7AQ9Y615 435 aa22.2■■□□□ 1.14
PNKP-220ENST00000627232 CBX4O00257 560 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 TGM5O43548 720 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 CCDC22O60826 627 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 RPP40O75818 363 aaKnown RBP22.19■■□□□ 1.14
PNKP-220ENST00000627232 LUC7L3O95232 432 aaKnown RBP22.19■■□□□ 1.14
PNKP-220ENST00000627232 C1RP00736 705 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 LINC00271P0C7V0 271 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 KITP10721 976 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 ALOX15P16050 662 aaPredicted RBP22.19■■□□□ 1.14
PNKP-220ENST00000627232 HNRNPH1P31943 449 aaKnown RBP22.19■■□□□ 1.14
PNKP-220ENST00000627232 AVPR1AP37288 418 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 RGRP47804 291 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 LILRA6Q6PI73 481 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 OTOP2Q7RTS6 562 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 OR6P1Q8NGX9 317 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 MRPS31Q92665 395 aaKnown RBP22.19■■□□□ 1.14
PNKP-220ENST00000627232 OMDQ99983 421 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 LSM7Q9UK45 103 aaKnown RBP22.19■■□□□ 1.14
PNKP-220ENST00000627232 TRIM33Q9UPN9 1127 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 ZNF510Q9Y2H8 683 aa22.19■■□□□ 1.14
PNKP-220ENST00000627232 TARM1B6A8C7 271 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 H0Y626 953 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 CRTAMO95727 393 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 LRG1P02750 347 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 ARSDP51689 593 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 SLC7A9P82251 487 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 ARF5P84085 180 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 RIPK1Q13546 671 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 GALNT3Q14435 633 aa22.18■■□□□ 1.14
PNKP-220ENST00000627232 INO80DQ53TQ3 878 aaPredicted RBP22.18■■□□□ 1.14
PNKP-220ENST00000627232 TXNDC8Q6A555 127 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms