RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 TBC1D25Q3MII6 688 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 INO80DQ53TQ3 878 aaPredicted RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 PPP6R3Q5H9R7 873 aaPredicted RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 PLEKHA7Q6IQ23 1121 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 EFL1Q7Z2Z2 1120 aaKnown RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 ZNF571Q7Z3V5 609 aaPredicted RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 CAMK1DQ8IU85 385 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 ARHGAP12Q8IWW6 846 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 SLC35F3Q8IY50 421 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 TSEN2Q8NCE0 465 aaKnown RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 FAM174AQ8TBP5 190 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 MAPK15Q8TD08 544 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 ASB12Q8WXK4 309 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 ARHGEF26Q96DR7 871 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 NAF1Q96HR8 494 aaKnown RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 NSMCE3Q96MG7 304 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 DUSP23Q9BVJ7 150 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 CLPBQ9H078 707 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 HAUS4Q9H6D7 363 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
CHD2-210ENST00000627200 DKK3Q9UBP4 350 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 OR1A2Q9Y585 309 aa9.5□□□□□ -0.89
CHD2-210ENST00000627200 TSPAN11A1L157 253 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 TTC24A2A3L6 582 aaPredicted RBP9.49□□□□□ -0.89
CHD2-210ENST00000627200 GOLGA6L22H0YM25 854 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 DFFAO00273 331 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 DDX3XO00571 662 aaKnown RBP eCLIP9.49□□□□□ -0.89
CHD2-210ENST00000627200 MBD3O95983 291 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 PCCBP05166 539 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 GP1BAP07359 652 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 TCF4P15884 667 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 TSHRP16473 764 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 XPAP23025 273 aaPredicted RBP9.49□□□□□ -0.89
CHD2-210ENST00000627200 MIPP30301 263 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 MMP12P39900 470 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 LIG3P49916 1009 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 PDX1P52945 283 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 AIF1P55008 147 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 RAD51Q06609 339 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 RALGDSQ12967 914 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 ACAP1Q15027 740 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 UGP2Q16851 508 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 ALG11Q2TAA5 492 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 SMTNL2Q2TAL5 461 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 TMEM52BQ4KMG9 183 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 C3orf38Q5JPI3 329 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 AFMIDQ63HM1 303 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 MACC1Q6ZN28 852 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 RFX8Q6ZV50 586 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 ZSCAN30Q86W11 494 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 CACTIN-AS1Q8N1I8 211 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 KYQ8NBH2 561 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 PCDH19Q8TAB3 1148 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 FGF11Q92914 225 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 TSACCQ96A04 125 aaPredicted RBP9.49□□□□□ -0.89
CHD2-210ENST00000627200 ATXN7L3BQ96GX2 97 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 NAP1L5Q96NT1 182 aaPredicted RBP9.49□□□□□ -0.89
CHD2-210ENST00000627200 DEPDC7Q96QD5 511 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 IL12RB2Q99665 862 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 BOCQ9BWV1 1114 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 ABCG4Q9H172 646 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 SYNDIG1Q9H7V2 258 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 PARVAQ9NVD7 372 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 SIRPGQ9P1W8 387 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 SPASTQ9UBP0 616 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 CSNK1G3Q9Y6M4 447 aa9.49□□□□□ -0.89
CHD2-210ENST00000627200 RP1P56715 2156 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 EME2A4GXA9 379 aaPredicted RBP9.48□□□□□ -0.89
CHD2-210ENST00000627200 TMEM191CA6NGB0 347 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 RIOK3O14730 519 aaKnown RBP9.48□□□□□ -0.89
CHD2-210ENST00000627200 YY2O15391 372 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 RRP8O43159 456 aaKnown RBP9.48□□□□□ -0.89
CHD2-210ENST00000627200 LRCH4O75427 683 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 FTLP02792 175 aaPredicted RBP9.48□□□□□ -0.89
CHD2-210ENST00000627200 CCDC172P0C7W6 258 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 SKILP12757 684 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 ERCC2P18074 760 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 IL1R2P27930 398 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 DUSP3P51452 185 aaPredicted RBP9.48□□□□□ -0.89
CHD2-210ENST00000627200 NDST2P52849 883 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 PPARDQ03181 441 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 TLE3Q04726 772 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 PTK2BQ14289 1009 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 INPP5AQ14642 412 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 LRRC14Q15048 493 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 NR0B2Q15466 257 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 ISXQ2M1V0 245 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 C6orf132Q5T0Z8 1188 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 CFAP58Q5T655 872 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 FAXCQ5TGI0 409 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 CAVIN1Q6NZI2 390 aaKnown RBP9.48□□□□□ -0.89
CHD2-210ENST00000627200 LRRC69Q6ZNQ3 347 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 RD3Q7Z3Z2 195 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 HID1Q8IV36 788 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 SFTPA2Q8IWL1 248 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 SPACA3Q8IXA5 215 aa9.48□□□□□ -0.89
CHD2-210ENST00000627200 PELI3Q8N2H9 469 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms