RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 IFI35P80217 286 aaPredicted RBP14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 XRCC4Q13426 336 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 CCDC6Q16204 474 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 UGP2Q16851 508 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 TMEM259Q4ZIN3 620 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 STPG1Q5TH74 334 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 CCDC181Q5TID7 509 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 MFSD7Q6UXD7 560 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 BBS12Q6ZW61 710 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 DCP2Q8IU60 420 aaKnown RBP14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 CXorf40AQ8TE69 158 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 HAUS1Q96CS2 278 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 OLFM3Q96PB7 478 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 VAT1Q99536 393 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 AASDHPPTQ9NRN7 309 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 DLL3Q9NYJ7 618 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 TFR2Q9UP52 801 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 ATP8A1Q9Y2Q0 1164 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 DUSP10Q9Y6W6 482 aa14.14□□□□□ -0.15
SNRPA1-216ENST00000626000 GOLGA6L9A6NEM1 432 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 PATE3B3GLJ2 98 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 APOC4-APOC2K7ER74 178 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 OPHN1O60890 802 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 APOC2P02655 101 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 RPL26P61254 145 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 GRIK2Q13002 908 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 SLC14A2Q15849 920 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 ZNF284Q2VY69 593 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 INAVAQ3KP66 663 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 TCEAL6Q6IPX3 200 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 NT5DC3Q86UY8 548 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 TP53INP2Q8IXH6 220 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 TTC13Q8NBP0 860 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 TFB1MQ8WVM0 346 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 LENG8Q96PV6 779 aaPredicted RBP14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 ORAI3Q9BRQ5 295 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 GOLPH3Q9H4A6 298 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 ERVMER34-1Q9H9K5 563 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 GDF3Q9NR23 364 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 DNAAF2Q9NVR5 837 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 RBM22Q9NW64 420 aaKnown RBP eCLIP14.13□□□□□ -0.153e-9■■■■■ 38.6
SNRPA1-216ENST00000626000 RPL26L1Q9UNX3 145 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 PCDH15Q96QU1 1955 aa14.13□□□□□ -0.15
SNRPA1-216ENST00000626000 PLK4O00444 970 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 HTRA2O43464 458 aaPredicted RBP14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 TM7SF2O76062 418 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 PIGNO95427 931 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 GKP32189 559 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 ABL2P42684 1182 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 ID4P47928 161 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 PPP2CBP62714 309 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 DYNLT1P63172 113 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 PPP2CAP67775 309 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 ITKQ08881 620 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 AP1B1Q10567 949 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 SUZ12Q15022 739 aaKnown RBP14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 RSPO4Q2I0M5 234 aaPredicted RBP14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 TMEM52BQ4KMG9 183 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 ARMC12Q5T9G4 340 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 USP45Q70EL2 814 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 CAMK1DQ8IU85 385 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 MINDY1Q8N5J2 469 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 TRIM58Q8NG06 486 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 KRT35Q92764 455 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 PPP1R2P1Q96PQ5 205 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 IL12RB2Q99665 862 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 SEMA3CQ99985 751 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 GTPBP2Q9BX10 602 aaKnown RBP14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 C1QTNF2Q9BXJ5 285 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 SLC17A9Q9BYT1 436 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 OSBPL8Q9BZF1 889 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 SMOC1Q9H4F8 434 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 NT5MQ9NPB1 228 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 PHTF1Q9UMS5 762 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 ANKRD6Q9Y2G4 727 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 PCDHGB2Q9Y5G2 931 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 HS3ST3A1Q9Y663 406 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 CEP250Q9BV73 2442 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 TRPM6Q9BX84 2022 aa14.12□□□□□ -0.15
SNRPA1-216ENST00000626000 ANKRD36A6QL64 1941 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 A6NNZ2 444 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 TRAFD1O14545 582 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 RIOK3O14730 519 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 FPGTO14772 594 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 STK10O94804 968 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 CPP00450 1065 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 CYP2A6P11509 494 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 TIMP2P16035 220 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 MSNP26038 577 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 MAT2AP31153 395 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 MMP12P39900 470 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 TNNT3P45378 269 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 RGRP47804 291 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 ARRB1P49407 418 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 PEX5P50542 639 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 CCZ1BP86790 482 aa14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 CCZ1P86791 482 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 SLC10A2Q12908 348 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-216ENST00000626000 AGERQ15109 404 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms