RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TIMM23O14925 209 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 IFIT1P09914 478 aaKnown RBP3.45□□□□□ -1.86
VBP1-204ENST00000625964 FCGR1AP12314 374 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 ZNF8P17098 575 aaPredicted RBP3.45□□□□□ -1.86
VBP1-204ENST00000625964 PSMC2P35998 433 aaKnown RBP3.45□□□□□ -1.86
VBP1-204ENST00000625964 ADORA2A-AS1P86434 159 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 CYP4A11Q02928 519 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 LRRC8DQ7L1W4 858 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 TBC1D26Q86UD7 250 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 NEXN-AS1Q8NBZ9 246 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 OTULINQ96BN8 352 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 ZC3HAV1LQ96H79 300 aaKnown RBP3.45□□□□□ -1.86
VBP1-204ENST00000625964 MAELQ96JY0 434 aaKnown RBP3.45□□□□□ -1.86
VBP1-204ENST00000625964 INTS2Q9H0H0 1204 aaKnown RBP3.45□□□□□ -1.86
VBP1-204ENST00000625964 SNTG1Q9NSN8 517 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 BABAM1Q9NWV8 329 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 TMEM160Q9NX00 188 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 CTNNAL1Q9UBT7 734 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 NDRG3Q9UGV2 375 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 PAM16Q9Y3D7 125 aa3.45□□□□□ -1.86
VBP1-204ENST00000625964 A0A1B0GVM2 712 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 DYTNA2CJ06 578 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 HSPB2A8KAH6 182 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 RGS11O94810 467 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 PCNAP12004 261 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 RPL3P39023 403 aaKnown RBP3.44□□□□□ -1.86
VBP1-204ENST00000625964 PDLIM4P50479 330 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 MXI1P50539 228 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 CDH15P55291 814 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 ST3GAL1Q11201 340 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 TRPC3Q13507 836 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 ARHGEF6Q15052 776 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 HSPB2Q16082 182 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 IZUMO4Q1ZYL8 232 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 GPAT4Q86UL3 456 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 SFTPA2Q8IWL1 248 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 KIAA2013Q8IYS2 634 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 CLIP4Q8N3C7 705 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 GJC3Q8NFK1 279 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 TRIB2Q92519 343 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 USP13Q92995 863 aaPredicted RBP3.44□□□□□ -1.86
VBP1-204ENST00000625964 SLC25A33Q9BSK2 321 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 C6orf106Q9H6K1 298 aaPredicted RBP3.44□□□□□ -1.86
VBP1-204ENST00000625964 CYSLTR2Q9NS75 346 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 OCIAD1Q9NX40 245 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 SAGE1Q9NXZ1 904 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 AGO1Q9UL18 857 aaKnown RBP3.44□□□□□ -1.86
VBP1-204ENST00000625964 EVPLQ92817 2033 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 GOLGA6L10A0A0M3HER8 536 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 CLEC18AA5D8T8 446 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 KLRF2D3W0D1 207 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 NCAM2O15394 837 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 SOCS5O75159 536 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 CH25HO95992 272 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 URODP06132 367 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 HNRNPA1P09651 372 aaKnown RBP eCLIP3.44□□□□□ -1.86
VBP1-204ENST00000625964 PTPN2P17706 415 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 SRD5A1P18405 259 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 EDN2P20800 178 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 POU1F1P28069 291 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 RYKP34925 604 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 GGT5P36269 586 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 CXCR3P49682 368 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 ART1P52961 327 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 EFNB1P98172 346 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 TLE2Q04725 743 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 TRAF3Q13114 568 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 VEPH1Q14D04 833 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 SF3B4Q15427 424 aaKnown RBP eCLIP3.44□□□□□ -1.861e-6■□□□□ 8.6
VBP1-204ENST00000625964 ESCO2Q56NI9 601 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 ZNF766Q5HY98 468 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 EFHC1Q5JVL4 640 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 SERTAD4-AS1Q5TG53 156 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 TADA2BQ86TJ2 420 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 SMAP1Q8IYB5 467 aaPredicted RBP3.44□□□□□ -1.86
VBP1-204ENST00000625964 PARP16Q8N5Y8 322 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 PLD5Q8N7P1 536 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 CLEC18CQ8NCF0 446 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 ARRDC2Q8TBH0 407 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 FIZ1Q96SL8 496 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 BEX4Q9NWD9 120 aaPredicted RBP3.44□□□□□ -1.86
VBP1-204ENST00000625964 GGA3Q9NZ52 723 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 OR6C3Q9NZP0 311 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 KIAA1456Q9P272 454 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 PCDHGB1Q9Y5G3 927 aa3.44□□□□□ -1.86
VBP1-204ENST00000625964 TEX22C9J3V5 150 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 J3KR12 359 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 LDB3O75112 727 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 VNN2O95498 520 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 GALTP07902 379 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 ZNF12P17014 697 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 FMO4P31512 558 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 PIGAP37287 484 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 NR1H2P55055 460 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 CLDN2P57739 230 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 BNC1Q01954 994 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 ITGADQ13349 1161 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 TAF11Q15544 211 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 GPR68Q15743 365 aa3.43□□□□□ -1.86
VBP1-204ENST00000625964 LRRC8EQ6NSJ5 796 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms